Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_47810 |
Symbol | |
ID | 4384690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4253144 |
End bp | 4255183 |
Gene Length | 2040 bp |
Protein Length | 679 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639326410 |
Product | hypothetical protein |
Protein accession | YP_791975 |
Protein GI | 116049222 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00112495 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGC CTTCCTTCTT TTCCTCCGAC CTGGTGCAGG TGCTGCTGTG CCCGCGCCTG CACGAACTGC AGTTCGCGGT GAAGGCCCTG CTGGCCGGCG GGTTGGCCCT GTACCTGGCC TTCAGCCTGG AGCTGGAGCA GCCGCAATGG GCATTGATGA CGGTGTTCGT GGTCAGCCAG CCCTATAGCG GCATGGTCCT GGCCAAGGGC ATGTTCCGCC TGATCGGCAC CTGCGCCGGT GCGCTGGTGT CCATCGGCAT GGTCGCGCTC TATGGTCAGG CGTCGCTGCC CTTCCTCCTG CTGATGGCGC TCTGGCTGGC GTTCTGCACC GCCGGCGCGT CGCTGCTGCA CAACCATGCG TCCTACGGTT TCGTCCTGGC CGGCTACACC GCGGCGATCG TCGCCCTGCC GGCCAGCGCC GATCCGGCGA CGGTGTTCGA CCAGGCGGTG GCCCGCTGCT CGGAGATCGG CCTGGGCATC CTCTGCGCGG CGCTGGTGAA TGTACTGCTC TGGCCGCGGC GCCTGGAACG CCAGTTGGCG AACCAGGGCA AGGCGGCCTG GGAGGCCGGC TTGCAGGCGG CCGCGGCGGA GCTGCGCGGC GCCGACGAAC GCGGCGAGCT GCTCGCGGCG CTGGGGCGGA TCGCCGCGGC GGACGCCCAG CGCGACCACG CCTGGTTCGA GGGCGCACTC GGCCGCGCCC GTTCCCAGGC CTTGCGCGTG CTTGGCCTCG ACCTGCTCGG CCTGCTGCGC GCGGCGCGCA AGGTGGCTCG CGAGCGGAGG CTGCTCGATC CGGCCAGCGC GCACGCCTTG CAGCCCTGGC TGGAAGAACT CGAGGCACTG TTGCGCGAGG GCCGCCAGGC CGAGTTCGAG GCCTGCCGGC AGCGCTTGCG CCTGGCGCTG GACGCGGCGC ACGGACAGTT GCACCTGTGC CTGGTCTGCC TCGAACGCCT GCTCGGCGAG GCGAGGGCGG CCGGGCGCAG CGTCGAGGCG CTGGTCTATG GCGCGCCCAC CCGCCAGGCG CCGGGCGCCA TCGCCTGGCA CCGGGACATC GAGCGCGGCG TGCTGTTCGG CCTGCGCAGC GCCCTGGCGT TCCTCTGCGT AGCCGCGTTC TGGCTGGCCA GCGCCTGGCC GAGCGGGTTG GGCGCGGTGT CGATCACCGG CGTGGTGCTG AGTCTCTTCG CCAGCCGCGA CAACCCGGCC CAGGCCGGCC TGAACTTCCT TCGCGGGATT CTCCTGTCGA TCCCGCTGGC CGGCTTCGTC GCACTGTTCT ACCTGCCCGG CGTGGACGGC TTCCCGCTGC TCTGCCTGGG CCTGGGCGTA CCGCTGTTCT TCGCCGCGCT GTGCGTGAAC CGGGCGAGCC TGGCCGGGAT CGCCTCGCCG TTCTGCATCT TCTTCGTGAA GAACGTCGCG CCGAGCAACA GCATGAGCTA CGACCTCGCG CACTTCCTCA ACAACGCCCT GTCGACGGTG CTCGGGGTGG CCTTCGCCGT GCTGGTGTTC AACCTGGTCA GCCTGCGGCC GGGCGAACGC CATTACCGGC GCATGCTGCA GGCCACCCTC GGCGACCTGG CGCGGCTCAC CCTGCGCTCG CCGGCGCAGG CCGAGGCCTG GTTCGGCGGG CGCACCGCGG ATCGCCTGAT CCGCCTGGCG CAGCGCTACG ACCGTTTACC GGAGGGGCGC CGCCAGCCCT GGTCGGACGG CCTGATGGGA CTCGACTTCG GCGACGAGCT GCTCTACCTG CGGCAGTGCC TGGAGGAGGT CCCGGCGTCC CTGGCGCAGG CCCGCGACCG CTACCTGCGG CGCCTGCGCC TGGCGCTGCT GGGCGATGGC CCGCGGGCCG AGCGTGAACA CGCCCTCGAC CCGCCGACCG CGCGCCTGCT CAAGGCCCTG GCCGCCAGCC CGCTGGCCGG CAGCGAACGC GGCGAGCTGG CCGGCGCCGC GCTGGTGCAG TTGCAGGCCA CCTGGCGGCA GTGGTGCCGC AGCCATGCTC CGGCCGGGAC GGCGCTGCGC GCGGACCCGC TCCCCGGAGC CGGGCGCTAG
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Protein sequence | MAKPSFFSSD LVQVLLCPRL HELQFAVKAL LAGGLALYLA FSLELEQPQW ALMTVFVVSQ PYSGMVLAKG MFRLIGTCAG ALVSIGMVAL YGQASLPFLL LMALWLAFCT AGASLLHNHA SYGFVLAGYT AAIVALPASA DPATVFDQAV ARCSEIGLGI LCAALVNVLL WPRRLERQLA NQGKAAWEAG LQAAAAELRG ADERGELLAA LGRIAAADAQ RDHAWFEGAL GRARSQALRV LGLDLLGLLR AARKVARERR LLDPASAHAL QPWLEELEAL LREGRQAEFE ACRQRLRLAL DAAHGQLHLC LVCLERLLGE ARAAGRSVEA LVYGAPTRQA PGAIAWHRDI ERGVLFGLRS ALAFLCVAAF WLASAWPSGL GAVSITGVVL SLFASRDNPA QAGLNFLRGI LLSIPLAGFV ALFYLPGVDG FPLLCLGLGV PLFFAALCVN RASLAGIASP FCIFFVKNVA PSNSMSYDLA HFLNNALSTV LGVAFAVLVF NLVSLRPGER HYRRMLQATL GDLARLTLRS PAQAEAWFGG RTADRLIRLA QRYDRLPEGR RQPWSDGLMG LDFGDELLYL RQCLEEVPAS LAQARDRYLR RLRLALLGDG PRAEREHALD PPTARLLKAL AASPLAGSER GELAGAALVQ LQATWRQWCR SHAPAGTALR ADPLPGAGR
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