Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_47730 |
Symbol | cobD |
ID | 4384695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4247335 |
End bp | 4248273 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639326405 |
Product | cobalamin biosynthesis protein |
Protein accession | YP_791970 |
Protein GI | 116049227 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.452767 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAC TGCTGGGTAT CCTCGGCGTG GCGCTGGATG CGCGCTTCGG CGAGCCGCAG GGCTGGCACC CGCTGGTCGC CTTCGGCCGC CTGGCCGATC GCCTGGAGCG CCGTTTCAAC CGCTCGCGCC TGGCCGGCGA GGGCGATCCC GGGGTCGGCT GGCGCAGCCA CGGGGTGACC GCCTGGGTCC TCGCGGTACT GCCGCTGACC CTGCTGGCCT GGGCGCTCGC TGAACTTCCC TACCTCGGCT GGCTGGTCCA GGCCCTGGCG CTGTACGCCG CGCTCGGCCT GCGCAGCCTC GGCGAGCACG CCGAACCGGT GGCACTGGCC TTGCGCGCCG GCGACCTGGA CGAGGCGCGG CGACGTGTCG GCTACCTGGT CAGCCGCGAT ACCCGCGAGC TGGACCAGGC CGGGGTCGCC CGCGCGGCCA CCGAATCGGT ACTGGAGAAC GGCAGCGACG CGGTCTACGC CGCGCTGTTC TGGTTCGCCG TGGCCGGCGC GCCGGGGGTG GTGCTGTATC GCCTGAGCAA TACCCTGGAC GCGATGTGGG GCTACCGCAA CGCGCGCTTC GAGCGCTTCG GCTGGGCCGC GGCGAAGATC GACGACATCC TCAACTACCT GCCGGCGCGG CTGGTGGCGC TGACCTACGC GCTGCTCGGC GGCACCCGCC AGGCCCTGCG CTGCTGGCGC GAGCAGGCGC CGCAATGGGA CAGCCCCAAC GCCGGCCCGG TGATGGCCGC CGGCGCCGGT GCGCTGGGGG TTTCCCTGGG CGGCGCGGCG ATCTACCACG GCGAGCTGCA CCAGCGGCCG CTCCTCGGCA GCGGCCCGCA GCCGCAGGGC CGCGACATCT ATCGGGCCCT GGCGCTGGTA CGCCAGGGCG TGCTGCTCTG GCTGCTGGTG CTGGCCGGAC TCTGGGCCAT GGGGTGGCTG CATGCTTGA
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Protein sequence | MSALLGILGV ALDARFGEPQ GWHPLVAFGR LADRLERRFN RSRLAGEGDP GVGWRSHGVT AWVLAVLPLT LLAWALAELP YLGWLVQALA LYAALGLRSL GEHAEPVALA LRAGDLDEAR RRVGYLVSRD TRELDQAGVA RAATESVLEN GSDAVYAALF WFAVAGAPGV VLYRLSNTLD AMWGYRNARF ERFGWAAAKI DDILNYLPAR LVALTYALLG GTRQALRCWR EQAPQWDSPN AGPVMAAGAG ALGVSLGGAA IYHGELHQRP LLGSGPQPQG RDIYRALALV RQGVLLWLLV LAGLWAMGWL HA
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