Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_47640 |
Symbol | |
ID | 4384702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4240527 |
End bp | 4242032 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639326398 |
Product | major facilitator transporter |
Protein accession | YP_791963 |
Protein GI | 116049234 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.899355 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCGGC AGAACCGCTG GCTGGTCCTG GCCATCGTCT CCAGCGCCCT GTTCCTCATC ATCATCGACA TGACCGTGCT CTACACGGCC CTGCCGCGCC TGACCCACGA CCTCGGTGCG ACGGCCGCGG AGAAGCTCTG GATCGTCAAC GCCTATCCGC TGGTGGTCGC CGGCCTGCTG CCCGGCGCCG GCTTGCTCAG CGACCGCCTT GGCCACAAGC GGCTGTTCCT CGCCGGCCTG CCGCTGTTCG GCCTGGCCTC GCTGTGCGCC GCCTTCGCCC CCAGCGCCGC GGCGCTGATC GCCGCCCGCG CCGGGTTGGC GGTGGGCGCG GCACTGATGA TGCCGGCGAC CCTGTCGATC GTCCGCCATG TCTTCCAGGA CGAACGCGAA CGCGCCCTGG CCATCGGCAT CTGGGCCTCC GTCGCCTCTG CCGGCGCGGC GCTGGGGCCG GTGGTCGGCG GCGTGCTGCT GGAGTTCTTC TGGTGGGGCT CGGTGTTCCT CATCAACGTC CCGGTGGTGG TCGTCGCTTT GTTGCTGGCG CTGCCGGCCA TCCCGGCCTG CGGCGGCCAG TCGCGGCGCC CATGGGACGC CCTCGGCTCG CTGCAGGTGA TGTTCGGCCT GGTCGGGGTG GTGTATGCGA TCAAGGAACT CAGCACACGC GCCCCGGACT TCGGGCTGGC CGTCCTGGCC GCGCTCGGCG GCATGCTCTG CCTGTACCTG TTCGTCCGCC GCCAGCGCCG CGCCCGCGAA CCGATGATCG ACTTCGCGCT GTTCCGCAAC CGGCGCTTCG CCCGCGGCGT CGCGGTGGCC CTGGTGGCGA CCATGGCGCT GGTCGGCATG GAACTGGTGT TCAGCCAGCA CCTGCAACTG GTGCAGGGCC TGACGCCGCT GAAGGCCGGC CTGTTCGTCC TGCCGATCCC GCTGGCCTCG CTGGTGGTCG GGCCGCTGGC CGGCTGGCTG GTGCCGCGCT GGGGCGAGAA CCGGGTGATG TGCGCCTCCC TGCTGCTCGG CAGCGCCGGA TTGCTCGGCC TGGCCCTGTC CTACCAGTCC GCCACCGGAG CGCAACTGGC CAGCCTGGTG CTGCTCGGCG TCGGCTTCGG CGGCGCGATG ACCGCCGCCT CCACCGCGGT GATGCTCAAC GTGGACGAAC AGAGTTCCGG AATGGCGGCC GCCATCGAAG ACGTGTCCTA CGAACTGGGC GGGGTGATCG GCGTGACCCT GCTCGGCAGC CTGATGAGTT TCGTCTACGG GATGTCGCTG AGGCTGCCCT CGGCCGAGCT GCCGGCGCGG GTCCGCGACA GCCTCGACGA CGCCCTGTTG GTCGCCGAGG GCCTGGCGCC GGAGGTCGCG TCGCGGCTCG TCGAGCTTGC CCGGCAGGCT TTCGACCAGG CCTTCGTCGC CGTGCTGCTG GCCGCCGCCG CGCTGCTCTT CCTCAGCGCC ATGGCGGTCC TGCGCCAGCC GCGTCCGGCT ACAGAGCCAG CGCCACCAGC ACCGCACACT CGGTAA
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Protein sequence | MFRQNRWLVL AIVSSALFLI IIDMTVLYTA LPRLTHDLGA TAAEKLWIVN AYPLVVAGLL PGAGLLSDRL GHKRLFLAGL PLFGLASLCA AFAPSAAALI AARAGLAVGA ALMMPATLSI VRHVFQDERE RALAIGIWAS VASAGAALGP VVGGVLLEFF WWGSVFLINV PVVVVALLLA LPAIPACGGQ SRRPWDALGS LQVMFGLVGV VYAIKELSTR APDFGLAVLA ALGGMLCLYL FVRRQRRARE PMIDFALFRN RRFARGVAVA LVATMALVGM ELVFSQHLQL VQGLTPLKAG LFVLPIPLAS LVVGPLAGWL VPRWGENRVM CASLLLGSAG LLGLALSYQS ATGAQLASLV LLGVGFGGAM TAASTAVMLN VDEQSSGMAA AIEDVSYELG GVIGVTLLGS LMSFVYGMSL RLPSAELPAR VRDSLDDALL VAEGLAPEVA SRLVELARQA FDQAFVAVLL AAAALLFLSA MAVLRQPRPA TEPAPPAPHT R
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