| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_47400 |
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| Symbol | |
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| ID | 4384167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4224158 |
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| End bp | 4224685 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639326380 |
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| Product | RNA polymerase ECF-subfamily sigma-70 factor |
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| Protein accession | YP_791945 |
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| Protein GI | 116049252 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.00498189 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAGC GCTTCCGTGG TTCCGTCTCG CATGCCTATC AGGCGTTCCA TGGCGAGTTG
CTGCGCTTCC TGCGCAAGCA CCTGGGCAGT TCGGCGGACG CCGCCGACCT CGCCCAGGAT
ACTTTCGCCC AGTGGCTGAA ATGGCCGGGC CGGCAATCGG TCGAGCAGCC GCGCGCATTT
CTTTTCCAGA TCGCCCGCAA CCTGTTGCGC GACCATTGGC GCCGGCAGCA GAGCCGCGGC
CAGGATCTCG ACCGGCCGGC GGCGAACGAC GAACCCGCCG CGCTGGAAGG CGAGGCGGCC
GGGCCGGGCG AGCGTTTCGA ACAGCAGCAG CGCCTCAGCC ACCTGGCGGC CGCGCTGGCC
GAGCTGCCGC CGCGGCGGCG CGAAGCGTTC GTCCTGCACA AGTTCGACGG CCTGTCCCAG
GTCGAAGTGG CCGAGCGCAT GGGAATCTCC CTGAGCATGG TGGAAAAGCA CATCGCCAGC
GCCTTGCTGC ACTGCAAGCG GCGGCTTGGC CAGGGAGGCG AAGGATGA
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| Protein sequence | MDERFRGSVS HAYQAFHGEL LRFLRKHLGS SADAADLAQD TFAQWLKWPG RQSVEQPRAF
LFQIARNLLR DHWRRQQSRG QDLDRPAAND EPAALEGEAA GPGERFEQQQ RLSHLAAALA
ELPPRRREAF VLHKFDGLSQ VEVAERMGIS LSMVEKHIAS ALLHCKRRLG QGGEG
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