Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_46910 |
Symbol | |
ID | 4383055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4177924 |
End bp | 4178832 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639326338 |
Product | putative binding protein component of ABC transporter |
Protein accession | YP_791903 |
Protein GI | 116049294 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.00378951 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGTATCG CTCCCAGTCT GCTGAGCACC GCCATCGTGG CCGCTCTGTT GTCCGCTCCG GTCGTCGCTG ACGAGCTCAC CGGCACGCTG AAGAAGATCA AGGACACCGG CACCATCACC CTCGGTCACC GTGACGCTTC GATTCCCTTC TCCTACCTCG GCACCGAGCC GGGCAAGCCG ATCGGCTACT CCCACGACCT GCAACTGAAA GTGGTCGAGG CGGTGAAGAA GGAACTCAAC CTCCCCGACC TGAAGGTCCG CTATAACCTG GTCACCTCGC AGACCCGCAT CCCGCTGGTG CAGAACGGCA CCGTGGACAT CGAGTGCGGC TCTACCACCA ACAACGAAGA GCGCCAGAAG CAGGTCGACT TCTCCGTCGG CATCTTCGAG GTCGGCACCC GCCTGCTGTC GAAGAAGACC GCCAACATCA AGGACTTCGA CGACCTCAAG GGCAAGAACG TGGTGACCAC CGCCGGCACC ACCTCCGAGC GCCTGCTCAA GGCCATGAAC GCGGACAAGA AGATGGGCAT GAACATCATC TCCGCCAAGG ACCACGGCGA GTCCTTCATG ATGCTCGAGT CCGGCCGCGC GGTGGCCTTC ATGATGGACG ACGCGCTGCT CTACGGCGAA ATGGCCAAGG CCAAGAAGCC GGACGACTGG GTCGTCGGCG GCACCCCGCA GTCCTTCGAG ATCTACGGCT GCATGGTGCG CAAGGGCGAC GCGGCGTTCA AGAAAGTGGT CGACAAGGCC ATCACCGATA CCTACGCCTC CGGCGAGGTC AACAAGATCT ACGACAAGTG GTTCACCCAG CCGATCCCGC CGAAGGGCCT GAACCTCAAC TTCCCCATGA GCGAAGAGCT GAAGAAGCTG ATCGCCAGCC CGACCGACAA GGCCGCCGAG CAGATGTAA
|
Protein sequence | MRIAPSLLST AIVAALLSAP VVADELTGTL KKIKDTGTIT LGHRDASIPF SYLGTEPGKP IGYSHDLQLK VVEAVKKELN LPDLKVRYNL VTSQTRIPLV QNGTVDIECG STTNNEERQK QVDFSVGIFE VGTRLLSKKT ANIKDFDDLK GKNVVTTAGT TSERLLKAMN ADKKMGMNII SAKDHGESFM MLESGRAVAF MMDDALLYGE MAKAKKPDDW VVGGTPQSFE IYGCMVRKGD AAFKKVVDKA ITDTYASGEV NKIYDKWFTQ PIPPKGLNLN FPMSEELKKL IASPTDKAAE QM
|
| |