Gene PA14_46910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_46910 
Symbol 
ID4383055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4177924 
End bp4178832 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content62% 
IMG OID639326338 
Productputative binding protein component of ABC transporter 
Protein accessionYP_791903 
Protein GI116049294 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.00378951 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTATCG CTCCCAGTCT GCTGAGCACC GCCATCGTGG CCGCTCTGTT GTCCGCTCCG 
GTCGTCGCTG ACGAGCTCAC CGGCACGCTG AAGAAGATCA AGGACACCGG CACCATCACC
CTCGGTCACC GTGACGCTTC GATTCCCTTC TCCTACCTCG GCACCGAGCC GGGCAAGCCG
ATCGGCTACT CCCACGACCT GCAACTGAAA GTGGTCGAGG CGGTGAAGAA GGAACTCAAC
CTCCCCGACC TGAAGGTCCG CTATAACCTG GTCACCTCGC AGACCCGCAT CCCGCTGGTG
CAGAACGGCA CCGTGGACAT CGAGTGCGGC TCTACCACCA ACAACGAAGA GCGCCAGAAG
CAGGTCGACT TCTCCGTCGG CATCTTCGAG GTCGGCACCC GCCTGCTGTC GAAGAAGACC
GCCAACATCA AGGACTTCGA CGACCTCAAG GGCAAGAACG TGGTGACCAC CGCCGGCACC
ACCTCCGAGC GCCTGCTCAA GGCCATGAAC GCGGACAAGA AGATGGGCAT GAACATCATC
TCCGCCAAGG ACCACGGCGA GTCCTTCATG ATGCTCGAGT CCGGCCGCGC GGTGGCCTTC
ATGATGGACG ACGCGCTGCT CTACGGCGAA ATGGCCAAGG CCAAGAAGCC GGACGACTGG
GTCGTCGGCG GCACCCCGCA GTCCTTCGAG ATCTACGGCT GCATGGTGCG CAAGGGCGAC
GCGGCGTTCA AGAAAGTGGT CGACAAGGCC ATCACCGATA CCTACGCCTC CGGCGAGGTC
AACAAGATCT ACGACAAGTG GTTCACCCAG CCGATCCCGC CGAAGGGCCT GAACCTCAAC
TTCCCCATGA GCGAAGAGCT GAAGAAGCTG ATCGCCAGCC CGACCGACAA GGCCGCCGAG
CAGATGTAA
 
Protein sequence
MRIAPSLLST AIVAALLSAP VVADELTGTL KKIKDTGTIT LGHRDASIPF SYLGTEPGKP 
IGYSHDLQLK VVEAVKKELN LPDLKVRYNL VTSQTRIPLV QNGTVDIECG STTNNEERQK
QVDFSVGIFE VGTRLLSKKT ANIKDFDDLK GKNVVTTAGT TSERLLKAMN ADKKMGMNII
SAKDHGESFM MLESGRAVAF MMDDALLYGE MAKAKKPDDW VVGGTPQSFE IYGCMVRKGD
AAFKKVVDKA ITDTYASGEV NKIYDKWFTQ PIPPKGLNLN FPMSEELKKL IASPTDKAAE
QM