Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_46220 |
Symbol | |
ID | 4382302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4108837 |
End bp | 4109928 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639326276 |
Product | putative periplasmic spermidine/putrescine-binding protein |
Protein accession | YP_791841 |
Protein GI | 116049356 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0209379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.00257917 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAATCGA CTCGCAAGCT GCTGGCCGGC CTCGCGCTGG CCGTTTCCGC CGGGCTGGTC CAGGCCGCGC CGGAAGTACG GATCTACAAC TGGTTCGACT ACATCGCCCC GGACACCCTG AAGAACTTCC AGGCGCAGAC CGGCATCGCG CCGAAGTACG ACGTCTACGA CAGCAACGAG GTGCTCGAGG CCAAGCTGCT GTCCGGGCAT TCCGGCTACG ACCTGGTGGT GCCCAGCGAC AGCTTCCTGC CCAACTACCT GAAGGCCGAA GTGTTCCAGC CGCTGGACAA GAGCAAGCTG CCGAACTGGA AGAACCTCAA CCCGGCCCTG CTCAAGGTGC TTGCCGGCAA GGACCCCGGC AACCGCTACG TGATGCCCTA CATGTGGGGC ACCAACGGCA TCGCCTACAA CCTCGACAAG GTCCGCGCGG TGCTCGGCGA CGATGCGCCG CTGGACTCCT GGGACCTGGT GTTCAAGCCG GAGAACCTGG CGAAGCTGCA ACAGTGCGGC GTGGCCTTCC TCGACTCGCC CACCGAGGTG ATCCCCGAGG TGCTGCACTA TCTCGGCCTG TCGCCCAACA GCCACCAACC GGAAGACTAC CGCCGAGCCG AGGAGCACCT GGCGAAGCTG CGCCCGTACA TCACCTACTT CAGTTCCTCG AAGTTCGTCA GCGACCTGGC CAACGGCAAC GTCTGCGTGG CCATCGCCTG GTCCGGCGGA GCGATGCAGG CGGCCAACCG GGCCAGGGAA GCGAAGAACG GCATACGCAT CGAGTACCGC ATTCCGAAGG AGGGCGCCGC GGCCTGGTTC GACGTGCTGG CGATTCCGCG CGACGCGAAG AACGTCGAGC AGGCGCACGC CTTCCTCAAC TACCTGCTGC GCCCGGAGGT GGTGGCGCCG ATCTCCGACT ACGTGGCCTA CGCCAACCCG AACAAGGCGG CGGACGGTTT GATCTCGGCG GAGTTGCGCG ACAATCCGAA CGTCTACCCG CCGGAAGAAG TGCAGGCCAG GCTGTATTCG GTGGAGATGC TGCCGCCGAA GCTGGAGCGG CTGCGCACGC GGACCTGGAG CAGGATCAAG ACCGGCAAGT GA
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Protein sequence | MQSTRKLLAG LALAVSAGLV QAAPEVRIYN WFDYIAPDTL KNFQAQTGIA PKYDVYDSNE VLEAKLLSGH SGYDLVVPSD SFLPNYLKAE VFQPLDKSKL PNWKNLNPAL LKVLAGKDPG NRYVMPYMWG TNGIAYNLDK VRAVLGDDAP LDSWDLVFKP ENLAKLQQCG VAFLDSPTEV IPEVLHYLGL SPNSHQPEDY RRAEEHLAKL RPYITYFSSS KFVSDLANGN VCVAIAWSGG AMQAANRARE AKNGIRIEYR IPKEGAAAWF DVLAIPRDAK NVEQAHAFLN YLLRPEVVAP ISDYVAYANP NKAADGLISA ELRDNPNVYP PEEVQARLYS VEMLPPKLER LRTRTWSRIK TGK
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