Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_46110 |
Symbol | |
ID | 4382310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4100014 |
End bp | 4101405 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639326268 |
Product | putative sodium:solute symport protein |
Protein accession | YP_791833 |
Protein GI | 116049364 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0497302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.205453 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCTCG ACATATTCGT CGTTCTGATC TACGCCGCGG GCATGATCGC GCTGGGCTGG TACGGCATGC GCCGCGCCAA GACCCGCGAC GACTACCTGG TGGCCGGCCG CAACCTCGGC CCCGGCTTCT ACCTGGGAAC CATGGCCGCC ACCGTCCTCG GCGGCGCCTC CACCATCGGC ACCGTGCGCC TGGGCTACGT CCATGGCATC TCCGGCTTCT GGCTGTGCGG CGCGATCGGC CTCGGCATCG TCGGCCTCAG CCTGTTCCTG GCCAAGCCGC TGCTGAAGCT GAAGATCTAC ACCGTCACCC AGGTCCTGGA GCGTCGCTAC AACCCCGCCG CGCGCCACGC CAGCGCCCTG ATCATGCTGG TCTACGCACT GATGATCGGC GCCACCTCGA CCATCGCCAT CGGCACCGTC ATGCAGGTCC TGTTCGGCCT GCCGTTCTGG GTCTCGATCC TGATCGGCGG CGGCGTCGTG GTGCTCTACT CCACCATCGG CGGCATGTGG TCGCTGACCC TGACCGACAT CGTGCAGTTC CTGATCATGA CCGTTGGCCT GGTGTTCCTG CTGATGCCGC TGTCGATCAA CGACGCCGGC GGCTGGGACG CCCTGGTGGC CAAGCTGCCG GCCAGCTACT TCGACTTCAC CGCGATCGGC TGGGACACCA TCGTCACCTA CTTCCTGATC TACTTCTTCG GCATCTTCAT CGGCCAGGAC ATCTGGCAGC GGGTGTTCAC CGCCCGCAGC GAGACCGTGG CCAAGGTCGC CGGCTCCGCC GCCGGTATCT ACTGCGTGCT CTACGGCATG GCCGGGGCGC TGATCGGGAT GGCCGCCAAG GTCCTGCTGC CGGACCTGGA GAACGTCAAC AACGCCTTCG CCAGCGTGGT CGAGCACAGC CTGCCGAACG GCATCCGCGG CCTGGTCATC GCCGCCGCCC TGGCGGCGCT GATGTCCACC GCCAGCGCCG GCCTGCTGGC GGCGTCCACC ACCGTCACCC AGGACCTGCT GCCGCGCCTG CGCCGCGGCC GCGGCCAGTC CGACAACGGC GACGTGCACG AGAACCGCAT CGCCACCCTG CTGCTGGGCC TGGTAGTGCT CGGCATCGCC CTGGTGGTCA GCGACGTGAT CAGCGCCCTG ACCGTGGCCT ACAACCTGCT GGTAGGCGGC ATGCTGATCC CGCTGATCGG CGCGATCTAC TGGAAGCGCG CCAGCACCGC CGGCGCCATC ACCAGCATGA CCCTGGGCTT CCTTACCGTG CTGGTGTTCA TGATCAAGGA CGGCCTCGAC GCCAATACGC CGATCTACTA CAGCCTGGCG GTCGGCCTGC TCAGCTTCGT CCTGGTCAGC CTGTTCTCGC GGCGCCCGAC GGGTGTCGCC AGCGCCGCCT GA
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Protein sequence | MALDIFVVLI YAAGMIALGW YGMRRAKTRD DYLVAGRNLG PGFYLGTMAA TVLGGASTIG TVRLGYVHGI SGFWLCGAIG LGIVGLSLFL AKPLLKLKIY TVTQVLERRY NPAARHASAL IMLVYALMIG ATSTIAIGTV MQVLFGLPFW VSILIGGGVV VLYSTIGGMW SLTLTDIVQF LIMTVGLVFL LMPLSINDAG GWDALVAKLP ASYFDFTAIG WDTIVTYFLI YFFGIFIGQD IWQRVFTARS ETVAKVAGSA AGIYCVLYGM AGALIGMAAK VLLPDLENVN NAFASVVEHS LPNGIRGLVI AAALAALMST ASAGLLAAST TVTQDLLPRL RRGRGQSDNG DVHENRIATL LLGLVVLGIA LVVSDVISAL TVAYNLLVGG MLIPLIGAIY WKRASTAGAI TSMTLGFLTV LVFMIKDGLD ANTPIYYSLA VGLLSFVLVS LFSRRPTGVA SAA
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