| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_45960 |
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| Symbol | lasR |
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| ID | 4382864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4085339 |
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| End bp | 4086058 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639326257 |
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| Product | transcriptional regulator LasR |
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| Protein accession | YP_791822 |
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| Protein GI | 116049375 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTGG TTGACGGTTT TCTTGAGCTG GAACGCTCAA GTGGAAAATT GGAGTGGAGC
GCCATCCTGC AGAAGATGGC GAGCGACCTT GGATTCTCGA AGATCCTCTT CGGCCTGTTG
CCTAAGGACA GCCAGGACTA CGAGAACGCC TTCATCGTCG GCAACTACCC GGCCGCCTGG
CGCGAGCATT ACGACCGGGC TGGCTACGCG CGGGTCGACC CAACGGTCAG TCACTGTACC
CAGAGCGTAC TGCCGATTTT CTGGGAACCG TCCATCTACC AGACGCGAAA GCAGCACGAG
TTCTTCGAGG AAGCCTCGGC GGCCGGCCTG GTGTATGGGC TGACCATGCC GCTGCATGGT
GCGCGCGGCG AACTCGGCGC GCTGAGCCTC AGCGTGGAAG CGGAAAACCG GGCCGAGGCC
AACCGTTTCA TGGAGTCGGT CCTGCCGACC CTGTGGATGC TCAAGGACTA CGCACTGCAG
AGCGGTGCCG GACTGGCCTT CGAACATCCG GTCAGCAAAC CGGTGGTTCT GACCAGCCGG
GAGAAGGAAG TGTTGCAGTG GTGCGCCATC GGCAAGACCA GTTGGGAGAT ATCGGTTATC
TGCAACTGCT CGGAAGCCAA TGTGAACTTC CATATGGGAA ATATTCGGCG GAAGTTCGGT
GTGACCTCCC GCCGCGTAGC GGCCATTATG GCCGTTAATT TGGGTCTTAT TACTCTCTGA
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| Protein sequence | MALVDGFLEL ERSSGKLEWS AILQKMASDL GFSKILFGLL PKDSQDYENA FIVGNYPAAW
REHYDRAGYA RVDPTVSHCT QSVLPIFWEP SIYQTRKQHE FFEEASAAGL VYGLTMPLHG
ARGELGALSL SVEAENRAEA NRFMESVLPT LWMLKDYALQ SGAGLAFEHP VSKPVVLTSR
EKEVLQWCAI GKTSWEISVI CNCSEANVNF HMGNIRRKFG VTSRRVAAIM AVNLGLITL
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