| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_45590 |
|---|
| Symbol | |
|---|
| ID | 4380185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 4054930 |
|---|
| End bp | 4057191 |
|---|
| Gene Length | 2262 bp |
|---|
| Protein Length | 753 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639326229 |
|---|
| Product | putative two-component sensor |
|---|
| Protein accession | YP_791794 |
|---|
| Protein GI | 116049403 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.267862 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTCG ACGCCGATGA AGAAATCCTC CAGGACTTCC TGGTTGAGGC CGGCGAGATT
CTCGAGCAAT TGTCCGAGCA ACTGGTCGAG CTGGAGAGCC GGCCGGACGA CATGGACCTG
CTCAATGCCA TTTTCCGTGG GTTCCATACG GTCAAGGGCG GTGCCGGCTT CCTCCAGCTG
AACGCGCTGG TGGAATGCTG CCACATTGCG GAAAACGTCT TCGATATCCT GCGCAAGGGC
GAGCGGCGCG TCAGCTCCGA ACTGATGGAT GTGGTGCTGC AGGCGCTGGA TACGGTCAAC
GCGATGTTCG ACCAGGTGCG CGAGCAGTCC GAACCGACCC CGGCGACGCC CGAGCTGCTG
GCGGCCCTTG CCCGCCTGGC CGAGCCTGAG GGCGCCGCGC CCGCGGAACC TGTGCAAGCG
CCGCCGGCGG CCGTTCCGCC AGCCGAGCCT GCGGCGCCGC CGGAAGCGCC CGCGCAGAGT
GTCTCCAGCG ATATCACCGA CGACGAGTTC GAGCAGTTGC TGGATGCTCT CCAGGGCGAC
GAAGCGCCGG CCTCCGCCGT TGCAGAAGCG TCCGCGGCTC CCGCTGGCGA CGAGATCAGC
GACGCCGAGT TCGAGGCGTT GCTCGACCAG TTGCACGGCA AGGGCAAGTT CGTCCCGCCG
GCGGTCTCGG CCGAGCCTGC GCAAGTCCCC GCCGAGGCGG TCGAGCCGGC CGCGGCTGCC
GCTGGTGACG ATATCAGCGA CGACGAGTTC GAGGCGCTGC TCGACGAACT GCACGGCAAG
GGCAAGTTCG GCGATGTCCC GGAAGCCGCC GGCACACCCG CCGCACCGGC TGCCGCGGCT
CCAGCGGCTG CGCCGGCGGA GCAGGGCAAG GCGCCGGCCG CCGCGGGCGG CGATGAGATC
AGCGACGACG AGTTCGAGTC GCTGCTCGAC GAACTGCACG GCAAGGGCAA GTTCAACGGC
GCCTCCGAAG CCGTGGCGGC CGCTGCGGCG GTAGCCAAGA ACATCGCGGC GAAGAGTCCC
GCGGCGAAAC CGGTCGCTCC GGCCAAGGCC GCCGCCGCGC GTCCGGCGGC GCCCGACAGG
CCGGCGGCGA GCGAGGCGGA GACCACCGTG CGGGTGGATA CGGCGCGTCT CGACGAGATC
ATGAACATGG TCGGCGAGCT GGTGCTGGTG CGTAACCGCC TGGTGCGCCT GGGCCTGAAC
AGCGGCGACG AGGCCATGGC CAAGGCCGTG GCCAACCTCG ACGTGGTCAC CGGCGACCTG
CAGATGTCGG TGATGAAGAC CCGCATGCAG CCGATCAAGA AGGTCTTCGG CCGCTTCCCG
CGTCTGGTCC GCGACCTGGC GCGGAACATG AAGAAAGAGA TCAACCTGGA GCTGGTGGGC
GAAGAGACCG ACCTCGACAA GAACCTGGTC GAGGCCCTCG CCGATCCGCT GGTGCACCTG
GTGCGCAACG CCGTCGACCA CGGCATCGAG AGTCCGGAGG AGCGCGAGGC CGCCGGCAAG
CCGCGGGTCG GCCAGGTGGT GCTGTCGGCG GAGCAGGAGG GCGACCACAT CCTCCTGATG
ATCACCGACG ACGGCAAGGG CATGGACGCC GAGGTGCTGC GCAACAAGGC GGTGGAGAAA
GGCCTGCTGG AGCGCGACGC GGCGGACCGC CTGACCGACC TGGAGTGCTA CAACCTGATC
TTCGCCCCGG GTTTCTCGAC CAAGACCGAG ATTTCCGACG TGTCCGGCCG CGGCGTCGGC
ATGGACGTGG TGAAGACCAA GATTTCCCAG CTCAACGGCA CGGTCAACGT GTTCTCGCAG
AAGGGGTCCG GCTCGAAGAT CGTCATCAAG GTGCCGCTGA CCCTGGCGAT CATGCCTACC
CTTATGGTGA TGCTGGGTAG CCAGGCGTTC GCCTTCCCGC TGGTCAACGT CAACGAAATC
TTCCATCTTG ACCTGTCGCG CACCAATGTC GTGGATGGCC AGGAAGTGGT GATCGTCCGC
GACAAGGCCT TGCCGCTGTT CTACCTCAAG CGCTGGCTGG TGCCGAGCGC GGCCCACGAG
GAGCAGGGCG AGGGGCACGT GGTGATCCTG TCGGTCGGCA CCCAGCGCAT CGGTTTCGTC
GTCGACCAGT TGGTGGGACA AGAAGAAGTG GTGATCAAGC CACTCGGCAA GATGTTGCAG
GGCACCCCCG GCATGGCGGG CGCCACCATC ACCGGGGACG GGCGCATCGC CCTGATCCTC
GATGTGCCGA GCATGCTCAA GCGTTACGCA CGGCGCATCT GA
|
|---|
| Protein sequence | MSFDADEEIL QDFLVEAGEI LEQLSEQLVE LESRPDDMDL LNAIFRGFHT VKGGAGFLQL
NALVECCHIA ENVFDILRKG ERRVSSELMD VVLQALDTVN AMFDQVREQS EPTPATPELL
AALARLAEPE GAAPAEPVQA PPAAVPPAEP AAPPEAPAQS VSSDITDDEF EQLLDALQGD
EAPASAVAEA SAAPAGDEIS DAEFEALLDQ LHGKGKFVPP AVSAEPAQVP AEAVEPAAAA
AGDDISDDEF EALLDELHGK GKFGDVPEAA GTPAAPAAAA PAAAPAEQGK APAAAGGDEI
SDDEFESLLD ELHGKGKFNG ASEAVAAAAA VAKNIAAKSP AAKPVAPAKA AAARPAAPDR
PAASEAETTV RVDTARLDEI MNMVGELVLV RNRLVRLGLN SGDEAMAKAV ANLDVVTGDL
QMSVMKTRMQ PIKKVFGRFP RLVRDLARNM KKEINLELVG EETDLDKNLV EALADPLVHL
VRNAVDHGIE SPEEREAAGK PRVGQVVLSA EQEGDHILLM ITDDGKGMDA EVLRNKAVEK
GLLERDAADR LTDLECYNLI FAPGFSTKTE ISDVSGRGVG MDVVKTKISQ LNGTVNVFSQ
KGSGSKIVIK VPLTLAIMPT LMVMLGSQAF AFPLVNVNEI FHLDLSRTNV VDGQEVVIVR
DKALPLFYLK RWLVPSAAHE EQGEGHVVIL SVGTQRIGFV VDQLVGQEEV VIKPLGKMLQ
GTPGMAGATI TGDGRIALIL DVPSMLKRYA RRI
|
|---|
| |