Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_45370 |
Symbol | ccmB |
ID | 4382831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4041267 |
End bp | 4041938 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639326213 |
Product | heme exporter protein CcmB |
Protein accession | YP_791778 |
Protein GI | 116049419 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAACG TCTTCAGCCT GCTTCTGGCG CGCGAGGCGC GCCTGCTGTT CCGCCGACCG GCGGAGCTGG CCAACCCGCT GGTGTTCTTC GCCATCGTCA TCGCCCTGTT CCCCCTGGCG GTCGGGCCGG AAAGCCAATT GCTACAAACC TTGTCGCCCG GCCTGGTCTG GGTGGCGGCG CTATTGGCCG TGCTGCTCTC GCTGGAAGGG CTGTTCCGCA GCGATTTCGA GGACGGTTCT CTGGAGCAGT GGGTCCTTTC GCCGCACCCC CTGGCTCTTC TGGTGCTGGC CAAGGTGCTG GCACACTGGC TGTTTTCCGG GCTGGCCCTG GTCCTGATGT CGCCGCTGTT CGCGCTGATG CTGGGCCTGC CGGCCCGTTG CATACCGGTG CTGCTGCTTT CCCTGTTGCT CGGTACGCCG GTGCTGAGCC TGCTCGGCGC CGTCGGCGCG GCCTTGACCG TGGGCCTCAA GCGCGGCGGC CTGTTGCTGG CGCTGCTGAT CCTGCCGCTG TACATCCCGG TGCTGATTCT CGGTAGCGGG GCGCTGCAGG CTTCGCTGCA GGGACTGCCC AGCAGCGGAC ATTTATTGTG GCTGGCGAGC CTGACGGCGC TAGCATTGAC ACTCACGCCA TTCGCCATCG CTGCCGGCCT GAAGATCAGC GTAGGCGAGT GA
|
Protein sequence | MSNVFSLLLA REARLLFRRP AELANPLVFF AIVIALFPLA VGPESQLLQT LSPGLVWVAA LLAVLLSLEG LFRSDFEDGS LEQWVLSPHP LALLVLAKVL AHWLFSGLAL VLMSPLFALM LGLPARCIPV LLLSLLLGTP VLSLLGAVGA ALTVGLKRGG LLLALLILPL YIPVLILGSG ALQASLQGLP SSGHLLWLAS LTALALTLTP FAIAAGLKIS VGE
|
| |