Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_44780 |
Symbol | |
ID | 4384717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3991629 |
End bp | 3992408 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639326168 |
Product | putative transcriptional regulator |
Protein accession | YP_791733 |
Protein GI | 116049464 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.13802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.152718 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATC AGTTGCAACA CATCAGGAAG CCGCCGCGCA CCGGCAAGGC TGCCCGCAGC GGTACCCAGG ACGAGATCGT CTACGCCCAC ATCTTCGACG CCATCCTCGA ACAACGCCTG GCCCCCGGCA CTAAGCTGAG CGAGGAAGCG CTCGGCGAGA TATTCGGCGT CAGCCGCACC ATCATTCGCC GCGCCCTCTC GCGCCTGGCC CACGAGCAGG TGGTGCTGTT ACGGCCGAAC CGCGGCGCGG TGGTCGCCAG CCCGAGCATC GACGAGGCCC GGCAGATCCT TTTCGCCCGC CGCACCGTCG AGCGCGCCAT CACCGAACTG GCCACCGACA ACGCCACCGC CGAGCGCCTG GCCGAGTTGC GCGAGATGGT GGTGCAGGAA CAATCCAGCT TCGCCCGTGG CGACCGGGGC GCCGGCATCC GCCTGTCCGG CGAGTTCCAC CTGAAGCTCG CCGAGATGGC GCGCAACGCT CCTCTGGTGA GTTTCCAGCG CAGCCTGGTG TCGCAGACCT CGCTGATCAT CGCCCAGTAC GAAAGCGGCG GTCGCTCGCA CTGCTCGTTC GACGAGCACA ACGAGATCCT CGACGCCATC GAGAAGGGCG ACAAGGAGCG CGCGGTGACC CTGATGATGC ACCACATGGA GCATATCGAC AGCAAGCTCA ACCTGGAGAG CGACAACGCT TCCGGCGACC TGCACGCGGT GTTCTCGCAC CTCCTCGGCG GCAAGAAGAA GCCACGCCGG GCCAAGGCCG ACAGCGACTC GGCGGCCTGA
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Protein sequence | MTDQLQHIRK PPRTGKAARS GTQDEIVYAH IFDAILEQRL APGTKLSEEA LGEIFGVSRT IIRRALSRLA HEQVVLLRPN RGAVVASPSI DEARQILFAR RTVERAITEL ATDNATAERL AELREMVVQE QSSFARGDRG AGIRLSGEFH LKLAEMARNA PLVSFQRSLV SQTSLIIAQY ESGGRSHCSF DEHNEILDAI EKGDKERAVT LMMHHMEHID SKLNLESDNA SGDLHAVFSH LLGGKKKPRR AKADSDSAA
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