| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_44030 |
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| Symbol | sdhA |
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| ID | 4385820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 3920241 |
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| End bp | 3922013 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639326103 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_791668 |
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| Protein GI | 116049528 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAGCA TTCGTACACT TTCCTTTGAC GCCATCATCG TCGGTGGCGG TGGCGCCGGC
ATGCGTGCCG CGCTGCAACT GGCCCAGGGC GGCCACAAGA CCGCCGTGGT GACCAAGGTC
TTCCCGACCC GTTCCCACAC CGTATCCGCA CAGGGCGGCA TCACCTGCGC CATCGCTTCG
GCCGACCCGA ACGACGATTG GCGTTGGCAC ATGTACGACA CCGTCAAGGG CTCCGACTAC
ATCGGTGACC AGGACGCGAT CGAATACATG TGTTCCGTCG GTCCCGAGGC CGTGTTCGAG
CTCGAGCACA TGGGCCTGCC GTTCTCCCGT ACCGAAACCG GCCGCATCTA CCAGCGTCCG
TTCGGCGGCC AGTCCAAGGA CTTCGGCAAG GGTGGCCAGG CCGCCCGTAC CTGCGCCGCC
GCCGACCGTA CCGGCCACGC GCTGCTGCAC ACCCTGTACC AGGCCAACCT GAAGAATGGC
ACCTCGTTCC TCAACGAGTG GTACGCGGTC GACCTGGTGA AGAACCAGGA CGGCGCGGTG
GTCGGCATCA TCGCCATCTG CATCGAGACC GGCGAGACCG TCTATATCCG TTCCAAGGCC
GTGGTCCTGG CCACTGGCGG TGCCGGCCGT ATCTACGCCT CCACCACCAA CGCGCTGATC
AACACCGGTG ACGGCGTGGG CATGGCCCTG CGTGCCGGCG TGCCGGTGCA GGACATCGAG
ATGTGGCAGT TCCACCCGAC CGGCATCGCC GGCGCCGGTG TACTGGTCAC CGAAGGTTGC
CGCGGCGAAG GCGGCTACCT GATCAACGCC CACGGCGAGC GCTTCATGGA GCGTTATGCG
CCGAACGCGA AGGACCTGGC CGGTCGCGAC GTGGTCGCTC GTTCCATGGT CAAGGAAGTC
CTGGCCGGCA ACGGCGTGGG CCCGAACAAG GACCACGTGC TGCTGAAACT CGACCACCTC
GGCGAGGAAG TCCTGCACAG CCGCCTGCCC GGCATCTGCG AACTGTCCAA GACCTTCGCC
CACGTCGACC CGGTCGTCGC GCCGATCCCG GTGATCCCGA CCTGCCACTA CATGATGGGT
GGCGTTGCCA CCAACATCCA TGGCCAGGCC ATCACCCAGG ATGCCAATGG CAACGACCAG
ATCGTCGAAG GCCTGTTCGC CGTAGGCGAA GTGGCCTGCG TATCGGTACA CGGCGCCAAC
CGCCTGGGCG GCAACTCGCT GCTCGACCTG GTGGTATTCG GCCGTGCCGC CGGTCTGCAC
CTGGAAAAAG CGCTGAAAGA AGGCATCGAC GCCCGCGGCG CTTCCGAGAG CGACCTGGAA
GCCTCCTTCA AGCGCCTGAA CGGCGTGAAC GAGCGCACCA GCGGCGAAGA AGTCGCTCCG
CTCAAGCGCG AGCTGCAAAG CTGCATGCAG AACTACTTCG GTGTATTCCG CACCGGCGAG
TACATGCAGA AGGGCATCGC CCAGCTGGCC GACCTGCGCG AGCGTATCGC CAACGTCAAG
ATCAACGACA AGAGCCAGGC ATTCAACACC GCGCGCATCG AAGCGCTGGA ACTGCAAAAC
CTCCTCGAGG TGGCCGAGGC CACCGCGATC GCGGCCGAGC ACCGCAAGGA GTCCCGTGGC
GCCCACGCCC GTGAAGACTT CGAGGAGCGC GACGACGAGA ACTGGCTGTG CCACACCCTG
TACTTCCCGG GTGAGAAGCG CGTATCCAAG CGTTCCGTCA ACTTCGCGCC GAAGACCGTT
CCGGCATTCG AACCCAAGGT TCGGACTTAC TAA
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| Protein sequence | MASIRTLSFD AIIVGGGGAG MRAALQLAQG GHKTAVVTKV FPTRSHTVSA QGGITCAIAS
ADPNDDWRWH MYDTVKGSDY IGDQDAIEYM CSVGPEAVFE LEHMGLPFSR TETGRIYQRP
FGGQSKDFGK GGQAARTCAA ADRTGHALLH TLYQANLKNG TSFLNEWYAV DLVKNQDGAV
VGIIAICIET GETVYIRSKA VVLATGGAGR IYASTTNALI NTGDGVGMAL RAGVPVQDIE
MWQFHPTGIA GAGVLVTEGC RGEGGYLINA HGERFMERYA PNAKDLAGRD VVARSMVKEV
LAGNGVGPNK DHVLLKLDHL GEEVLHSRLP GICELSKTFA HVDPVVAPIP VIPTCHYMMG
GVATNIHGQA ITQDANGNDQ IVEGLFAVGE VACVSVHGAN RLGGNSLLDL VVFGRAAGLH
LEKALKEGID ARGASESDLE ASFKRLNGVN ERTSGEEVAP LKRELQSCMQ NYFGVFRTGE
YMQKGIAQLA DLRERIANVK INDKSQAFNT ARIEALELQN LLEVAEATAI AAEHRKESRG
AHAREDFEER DDENWLCHTL YFPGEKRVSK RSVNFAPKTV PAFEPKVRTY
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