| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_44020 |
|---|
| Symbol | sdhB |
|---|
| ID | 4385821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 3919522 |
|---|
| End bp | 3920229 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639326102 |
|---|
| Product | succinate dehydrogenase iron-sulfur subunit |
|---|
| Protein accession | YP_791667 |
|---|
| Protein GI | 116049529 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 70 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCAAG TGAGTGTTTA TCGTTACAAC CCCGACAAAG ATGCTGCGCC GTACATGCAG
GATTTCCAGG TCGACACCAA CGGCAAGGAC GTGATGGTCC TCGACGTGCT GGCGCTGATC
AAGGAACAGG ACGAGGGCTT CTCCTACCGT CGTTCCTGCC GTGAAGGCGT CTGCGGCTCC
GATGGCATGA ACATCAACGG CAAGAACGGC CTGGCCTGCA TCACCCCGCT GTCGGCCGCC
GGCCTGAAGG GCGGCAAGCT GGTGATCCGT CCGCTGCCCG GCCTGCCGGT CATTCGTGAC
CTGGTCGTGG ACATGAGCAT CTTCTACAAG CAATACGAGA AGGTGAAGCC GTTCCTGCAG
AACGATACGC CGGCCCCGGC CATTGAGCGT CTGCAGACCC CGGAAGAGCG CGAGAAGCTG
GACGGTCTGT ACGAGTGCAT CCTGTGCGCC TGCTGCTCGA CCTCCTGCCC GTCCTTCTGG
TGGAACCCCG ACAAGTTCCT CGGTCCGGCC GCACTGCTGC AAGCCTATCG TTTCCTGGCC
GACAGCCGTG ACACCAAGAC CGAAGAGCGC CTGGCTTCGC TGGACGACCC GTTCAGTGTG
TTCCGCTGCC GCGGAATCAT GAACTGCGTG AACGTTTGCC CGAAGGGTCT GAACCCGACC
AAGGCGATCG GCCACGTGCG TAATATGCTG CTGCAGAGCG GAACCTGA
|
|---|
| Protein sequence | MLQVSVYRYN PDKDAAPYMQ DFQVDTNGKD VMVLDVLALI KEQDEGFSYR RSCREGVCGS
DGMNINGKNG LACITPLSAA GLKGGKLVIR PLPGLPVIRD LVVDMSIFYK QYEKVKPFLQ
NDTPAPAIER LQTPEEREKL DGLYECILCA CCSTSCPSFW WNPDKFLGPA ALLQAYRFLA
DSRDTKTEER LASLDDPFSV FRCRGIMNCV NVCPKGLNPT KAIGHVRNML LQSGT
|
|---|
| |