Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_43220 |
Symbol | |
ID | 4381799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3850461 |
End bp | 3852419 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639326039 |
Product | putative methyl-accepting chemotaxis transducer |
Protein accession | YP_791604 |
Protein GI | 116049591 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.625872 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGGGT TGCTGCGCAG GCGTCTGGCC GATCTCGGCA CGGCGAAGAA ACTGGCCATC GGTTTTACCC TGGTCCTGCT ATTGACCGCG CTGGTGGCCG CGCTCGCGGT GCTCTCGCTG CATGCGCTGG GGCAGCGCTT CGCGCGCCTG CAGGAGATGA GCGCGATCAA TCGCGACGTG CTGGAGGTTC GCCAGGCCGA GAAGGACTTT GCCCTGCACG GGGAAAAGAG CGACGCCGAG CGCTTGCGCC AGCGCCTGGC CGCGACCCTT GAACGGGTGG GCCGGCTCAA GGCCGACGGC GACGCCGATC AGGCGCTTGG CATGGCCGAG GTGGAGCAGG TGCTGGCGGC ATACCTCGAA GCGTTCGGCC GCTTCGAGCA GTCCATCCAG GGACGCCAGT TGGCTTGGGA AAGCGCCAGC TGGTCGCTGA ACGGCGCCGC CAACAGCCTC GATATCCTCC AGTCCAGCCT GGCCGAGGAT GGCGCCTATG CGCTGAAGGA GAGCCAGGGG CACGACGGCG AGCCGCTGTT GCAGCAGGCG GCCCAGGTCG CCCAGGTCAA TCGCCTGGTC CTTCAGGGGC TGGACGAGGC CCGCTCGCGT CTCGAAGCGC GCGCCGCGGA TGCGCAGGAG GGGCCGCCGA AATCGCTGCG CGAGGCGCTG GAGCTGGCAG CCCTGCTGGA GCAGGCGATC ACCGACGATG CCTACGTGTC GGTGGTCAAG GACGTGCTGA CCAATATCCG CGGTTTCGCC GACAAGCTCG CCGAGTATCG CGCCAGCCAG CGCCAGGAGC GGCAGATGTA CGCCGCCATG GGCGAGCGCG CCGGGCAGGT GATGGCGCGT GTCGACCGTA GCTGGGAGGC GCAGCAGCAG GCCATGCTCC ACAGCCTGCG GACAAACTCC CTGCTGATCG TCGGCGCCGC CGTGCTGGCG CTGCTGGTGG GCCTGGGCGC GGCCTTCGGC ATCAGCCTGC TGATCGTCCG TCCGCTGCGC CAGGCGATGG GTGTGGCGCA GCGGATCGCC GAAGGCGACC TGGCGGTACG GGTCGACAGC GAGCGGCGCG ACGAGGTTGG CCAACTGATG GCCGCGATGC GCGCCATGAC CGGCAGCCTG CGCGGTATCG TCAGCCAGTT GCAGGACGGC GTCGGGCGGA TTGCCGGCGC TTCCGAGGCG CTGTCCGGCG TTACCACGCG CACCCGCCTG GGAATCGACA GCCAGCGGGC GGAAACCGAA CAGGTGGCCA CGGCGATGAA CCAGATGGCC GCCACCGTCC ATGAAGTGGC GCACAACGCC GAGGAAGCCG CGGGGGCGGC GGAAAGCGCC GACGGCAAGG TCAGCGTCGG CCAGGAGGTG GTACGCCAGA CCCTGGAGCG GATCGAGCGA CTGGCCGAGG CGGTGCGCGC GGCCACCGCC AGCGTCGAGG CGCTGAGCGC CGACAGCCAG CGCATCGGCA GCATGCTGGA CGTGATCAAG AGCGTGGCCG AGCAGACCAA CCTGCTGGCG CTGAACGCCG CCATCGAGGC GGCGCGGGCC GGCGACCAGG GTCGAGGCTT CGCCGTGGTC GCCGACGAGG TGCGGGCGCT GGCGCGGCGC ACCCAACAGT CCACGGCCGA GATCGAGACC CTGATCGGTG CCTTGCAGAA TGGCACGCAG CAGGCGGTGC AGCGTATGCA GCGCAGCCAC CAGTTGGTGG ACCAGAGCGT CGACGACGCG TTGCAGACCG AGGCGGCGCT GGGCAACATC GCTACGGCGG TGGCGCTGAT CCAGCAGATG AACCAGCAGA TCGCCGCGGC CTCCGAGCAG CAGAGCGCGG TCGCCGAGGA GATCAACCGC AGCGTCACGG CGATCCGCGA GGTGGCCGAT CAGTCGGCCC AGGCCATGCA GTCGACGGCT TCGTCCAGCG AACAACTGGC GGAGCTGGGG CGCGAACTAC AGGGCATGGT CAGGCATTTC CGCTTGTAG
|
Protein sequence | MLGLLRRRLA DLGTAKKLAI GFTLVLLLTA LVAALAVLSL HALGQRFARL QEMSAINRDV LEVRQAEKDF ALHGEKSDAE RLRQRLAATL ERVGRLKADG DADQALGMAE VEQVLAAYLE AFGRFEQSIQ GRQLAWESAS WSLNGAANSL DILQSSLAED GAYALKESQG HDGEPLLQQA AQVAQVNRLV LQGLDEARSR LEARAADAQE GPPKSLREAL ELAALLEQAI TDDAYVSVVK DVLTNIRGFA DKLAEYRASQ RQERQMYAAM GERAGQVMAR VDRSWEAQQQ AMLHSLRTNS LLIVGAAVLA LLVGLGAAFG ISLLIVRPLR QAMGVAQRIA EGDLAVRVDS ERRDEVGQLM AAMRAMTGSL RGIVSQLQDG VGRIAGASEA LSGVTTRTRL GIDSQRAETE QVATAMNQMA ATVHEVAHNA EEAAGAAESA DGKVSVGQEV VRQTLERIER LAEAVRAATA SVEALSADSQ RIGSMLDVIK SVAEQTNLLA LNAAIEAARA GDQGRGFAVV ADEVRALARR TQQSTAEIET LIGALQNGTQ QAVQRMQRSH QLVDQSVDDA LQTEAALGNI ATAVALIQQM NQQIAAASEQ QSAVAEEINR SVTAIREVAD QSAQAMQSTA SSSEQLAELG RELQGMVRHF RL
|
| |