Gene PA14_43220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_43220 
Symbol 
ID4381799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3850461 
End bp3852419 
Gene Length1959 bp 
Protein Length652 aa 
Translation table11 
GC content70% 
IMG OID639326039 
Productputative methyl-accepting chemotaxis transducer 
Protein accessionYP_791604 
Protein GI116049591 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.625872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGGT TGCTGCGCAG GCGTCTGGCC GATCTCGGCA CGGCGAAGAA ACTGGCCATC 
GGTTTTACCC TGGTCCTGCT ATTGACCGCG CTGGTGGCCG CGCTCGCGGT GCTCTCGCTG
CATGCGCTGG GGCAGCGCTT CGCGCGCCTG CAGGAGATGA GCGCGATCAA TCGCGACGTG
CTGGAGGTTC GCCAGGCCGA GAAGGACTTT GCCCTGCACG GGGAAAAGAG CGACGCCGAG
CGCTTGCGCC AGCGCCTGGC CGCGACCCTT GAACGGGTGG GCCGGCTCAA GGCCGACGGC
GACGCCGATC AGGCGCTTGG CATGGCCGAG GTGGAGCAGG TGCTGGCGGC ATACCTCGAA
GCGTTCGGCC GCTTCGAGCA GTCCATCCAG GGACGCCAGT TGGCTTGGGA AAGCGCCAGC
TGGTCGCTGA ACGGCGCCGC CAACAGCCTC GATATCCTCC AGTCCAGCCT GGCCGAGGAT
GGCGCCTATG CGCTGAAGGA GAGCCAGGGG CACGACGGCG AGCCGCTGTT GCAGCAGGCG
GCCCAGGTCG CCCAGGTCAA TCGCCTGGTC CTTCAGGGGC TGGACGAGGC CCGCTCGCGT
CTCGAAGCGC GCGCCGCGGA TGCGCAGGAG GGGCCGCCGA AATCGCTGCG CGAGGCGCTG
GAGCTGGCAG CCCTGCTGGA GCAGGCGATC ACCGACGATG CCTACGTGTC GGTGGTCAAG
GACGTGCTGA CCAATATCCG CGGTTTCGCC GACAAGCTCG CCGAGTATCG CGCCAGCCAG
CGCCAGGAGC GGCAGATGTA CGCCGCCATG GGCGAGCGCG CCGGGCAGGT GATGGCGCGT
GTCGACCGTA GCTGGGAGGC GCAGCAGCAG GCCATGCTCC ACAGCCTGCG GACAAACTCC
CTGCTGATCG TCGGCGCCGC CGTGCTGGCG CTGCTGGTGG GCCTGGGCGC GGCCTTCGGC
ATCAGCCTGC TGATCGTCCG TCCGCTGCGC CAGGCGATGG GTGTGGCGCA GCGGATCGCC
GAAGGCGACC TGGCGGTACG GGTCGACAGC GAGCGGCGCG ACGAGGTTGG CCAACTGATG
GCCGCGATGC GCGCCATGAC CGGCAGCCTG CGCGGTATCG TCAGCCAGTT GCAGGACGGC
GTCGGGCGGA TTGCCGGCGC TTCCGAGGCG CTGTCCGGCG TTACCACGCG CACCCGCCTG
GGAATCGACA GCCAGCGGGC GGAAACCGAA CAGGTGGCCA CGGCGATGAA CCAGATGGCC
GCCACCGTCC ATGAAGTGGC GCACAACGCC GAGGAAGCCG CGGGGGCGGC GGAAAGCGCC
GACGGCAAGG TCAGCGTCGG CCAGGAGGTG GTACGCCAGA CCCTGGAGCG GATCGAGCGA
CTGGCCGAGG CGGTGCGCGC GGCCACCGCC AGCGTCGAGG CGCTGAGCGC CGACAGCCAG
CGCATCGGCA GCATGCTGGA CGTGATCAAG AGCGTGGCCG AGCAGACCAA CCTGCTGGCG
CTGAACGCCG CCATCGAGGC GGCGCGGGCC GGCGACCAGG GTCGAGGCTT CGCCGTGGTC
GCCGACGAGG TGCGGGCGCT GGCGCGGCGC ACCCAACAGT CCACGGCCGA GATCGAGACC
CTGATCGGTG CCTTGCAGAA TGGCACGCAG CAGGCGGTGC AGCGTATGCA GCGCAGCCAC
CAGTTGGTGG ACCAGAGCGT CGACGACGCG TTGCAGACCG AGGCGGCGCT GGGCAACATC
GCTACGGCGG TGGCGCTGAT CCAGCAGATG AACCAGCAGA TCGCCGCGGC CTCCGAGCAG
CAGAGCGCGG TCGCCGAGGA GATCAACCGC AGCGTCACGG CGATCCGCGA GGTGGCCGAT
CAGTCGGCCC AGGCCATGCA GTCGACGGCT TCGTCCAGCG AACAACTGGC GGAGCTGGGG
CGCGAACTAC AGGGCATGGT CAGGCATTTC CGCTTGTAG
 
Protein sequence
MLGLLRRRLA DLGTAKKLAI GFTLVLLLTA LVAALAVLSL HALGQRFARL QEMSAINRDV 
LEVRQAEKDF ALHGEKSDAE RLRQRLAATL ERVGRLKADG DADQALGMAE VEQVLAAYLE
AFGRFEQSIQ GRQLAWESAS WSLNGAANSL DILQSSLAED GAYALKESQG HDGEPLLQQA
AQVAQVNRLV LQGLDEARSR LEARAADAQE GPPKSLREAL ELAALLEQAI TDDAYVSVVK
DVLTNIRGFA DKLAEYRASQ RQERQMYAAM GERAGQVMAR VDRSWEAQQQ AMLHSLRTNS
LLIVGAAVLA LLVGLGAAFG ISLLIVRPLR QAMGVAQRIA EGDLAVRVDS ERRDEVGQLM
AAMRAMTGSL RGIVSQLQDG VGRIAGASEA LSGVTTRTRL GIDSQRAETE QVATAMNQMA
ATVHEVAHNA EEAAGAAESA DGKVSVGQEV VRQTLERIER LAEAVRAATA SVEALSADSQ
RIGSMLDVIK SVAEQTNLLA LNAAIEAARA GDQGRGFAVV ADEVRALARR TQQSTAEIET
LIGALQNGTQ QAVQRMQRSH QLVDQSVDDA LQTEAALGNI ATAVALIQQM NQQIAAASEQ
QSAVAEEINR SVTAIREVAD QSAQAMQSTA SSSEQLAELG RELQGMVRHF RL