Gene PA14_42130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_42130 
Symbol 
ID4380369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3758224 
End bp3758955 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content67% 
IMG OID639325947 
Producthypothetical protein 
Protein accessionYP_791512 
Protein GI116049683 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3484] Predicted proteasome-type protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTACT GTGTCGCGAT GCACCTGGCC GACGGCTTGG TGTTCGCCTC CGATTCGCGG 
ACCAACGCCG GGATCGACCA TATCGCCACC TTCCGCAAGC TGTTCACCTT CGGCACGCCC
GGAGAGCGCC TGCTGGTGGT GCAGACGGCC GGCAACCTGG CGACCTCGCA ATCGGTGATC
AACCTGCTGC AGCAGCGCAT CCGCCGGGAC GGCGCCAGCC TGCTCAACGT GCCCTCGGTC
TACGACGCCA CGGCGCTGAT CGCCGAGACC ACCCGCGAGG TGATGGCCCG CGACGGCGGC
AATCTGGCCG GCAATACCGA CCTGAGCTGC TCCTTCCTGG TCGGCGGGCA GATCGCCGGC
GGACCGCCGG CGCTGTACAG CATCTACCCC CAGGGCAACT TCATCCAGGC CACGCCGGAC
ACGCCTTTCC TGCAACTGGG CGAAAGCAAG TACGGCAAGC CGATCCTCGA CCGCAACCTG
ACTTTCGACA CGCCGCTGGA GCAGGCCCTG CGCTGCGCGC TGGTGTCGTT CGACTCGACC
ATCCGCAGCA ACCTCTCGGT GGGCATGCCG CTGGACCTGC TGGTCTACCA CCGCGACAGC
CTGATCCTGC CGGAGGGCTA CCGGGTCACC GAGGACGACG CCTATTTCAG CGCCATCCGC
CGCCAGTGGA GCGCCGGCCT GCACGACTTG CTGGAGCGCC TGCCGTCGCC GCCCTCGGCG
TACAACATCT GA
 
Protein sequence
MTYCVAMHLA DGLVFASDSR TNAGIDHIAT FRKLFTFGTP GERLLVVQTA GNLATSQSVI 
NLLQQRIRRD GASLLNVPSV YDATALIAET TREVMARDGG NLAGNTDLSC SFLVGGQIAG
GPPALYSIYP QGNFIQATPD TPFLQLGESK YGKPILDRNL TFDTPLEQAL RCALVSFDST
IRSNLSVGMP LDLLVYHRDS LILPEGYRVT EDDAYFSAIR RQWSAGLHDL LERLPSPPSA
YNI