Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_41250 |
Symbol | tig |
ID | 4383082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3680702 |
End bp | 3682012 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639325875 |
Product | trigger factor |
Protein accession | YP_791443 |
Protein GI | 116049750 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.755772 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAGTTT CTGTTGAAAG CACTTCCGCT CTTGAGCGCC GCATGACCGT TGGTGTGCCT GCCGAGCGTA TCGAGACCGA AGTCAACAAG CGTCTGCAGC AGACCGCCCG TCGTGCCAAG ATTCCAGGTT TCCGCCCCGG CAAGGTGCCG ATGAGTGTCA TTCGTCAGCG CTACGAAGCT TCCGCGCGCC AGGAAGCCAT GGGCGATCTG ATCCAGGAAA CCTTCTACGA AGCCGTGGTC GAGCAGAAGC TGAATCCGGC CGGTTCGCCG TCGGTAGAGC CCAAGTCCTT CGAGAAAGGC AAGGACCTGG AATACATCGC AACCTTCGAA GTCTTCCCGG AATTTACCGT TTCCGGCCTG GAAGATATCA AGGTCGAGCG CCTGCAGGCC GAAGTTTCCG ATGCTGATGT CGACAACATG CTCGATGTCC TGCGCAAGCA GAACACCCGT TTCGAAGTGG TCGAGCGTGC CGCCCAGAAC GATGACCAGT TGAACATCGA CTTCGTCGGC AAGATCGACG GCGAAGCCTT CGCCGGCGGT TCCGCCAAGG GCACCCTGCT GGTGCTGGGC TCCGGTCGCA TGATCGCCGG CTTCGAAGAA GGGCTGGTGG GGGCGAAGGC CGGTGAAGAG CGCGTGCTCA ACCTGACCTT CCCCGAGGAC TACCAGAACC TGGACCTGGC CAACAAGGCT GCCGAGTTCA CCGTTACCGT CAATAGCGTT GCCGAGCCCA AGCTGCCGGA ACTGAACGAA GAGTTCTTCG CTCTGTTCGG CGTGAAGGAA ACCGGTCTCG ATGGCTTCCG CGCCGAAGTG CAGAAGAACA TGGAGCGCGA GCTGCGCCAG GCGATCAAGT CCAAGGTCAA GAACCAGGTC ATGGAAGGTC TGCTGCAGGC CAACCCGATC GAAGTGCCCA AGGCCCTGAT CGGCAACGAA GTGAACCGTC TGCGCGTGCA GGCCGTCCAG CAGTTCGGTG GCAACATCAA GCCTGACCAA CTGCCGGCCG AGCTGTTCGA AGAGCAGGCC AAGCGCCGTG TGGTGCTGGG CCTGATCGTC GCCGAAGTGG TCAAGCAGCA CGAGCTGAAG GCCGACGAAG GTCGCGTTCG CGAAATGATC GAGGAAATGG CCTCGGCCTA CCAGGAGCCC GAGCAGGTCG TCGCCTGGTA CTTCAAGAAC GAGCCCCAGC TGAACGAAGT CCGTTCTGTT GTACTGGAAG AACAAGTCGT AGATACTGTC CTGCAAAAGG CCACTGTGAC CGATAAGCAG GTATCCTACG AAGAAGCGGT CAAGCCGGCC GAAGCTCCGC AAGCGGCCTG A
|
Protein sequence | MQVSVESTSA LERRMTVGVP AERIETEVNK RLQQTARRAK IPGFRPGKVP MSVIRQRYEA SARQEAMGDL IQETFYEAVV EQKLNPAGSP SVEPKSFEKG KDLEYIATFE VFPEFTVSGL EDIKVERLQA EVSDADVDNM LDVLRKQNTR FEVVERAAQN DDQLNIDFVG KIDGEAFAGG SAKGTLLVLG SGRMIAGFEE GLVGAKAGEE RVLNLTFPED YQNLDLANKA AEFTVTVNSV AEPKLPELNE EFFALFGVKE TGLDGFRAEV QKNMERELRQ AIKSKVKNQV MEGLLQANPI EVPKALIGNE VNRLRVQAVQ QFGGNIKPDQ LPAELFEEQA KRRVVLGLIV AEVVKQHELK ADEGRVREMI EEMASAYQEP EQVVAWYFKN EPQLNEVRSV VLEEQVVDTV LQKATVTDKQ VSYEEAVKPA EAPQAA
|
| |