Gene PA14_41150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_41150 
Symbol 
ID4383090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3670001 
End bp3671020 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content65% 
IMG OID639325866 
Productputative permease of ABC transporter 
Protein accessionYP_791435 
Protein GI116049758 
COG category[R] General function prediction only 
COG ID[COG4239] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGT CTCCCATCAA CCAGCGCCGC TGGGCCCGCT TCAAGAGCAA CAAGCGTGGC 
TGGTGGTCGC TCTGGCTGTT CCTCATCCTG TTCGTCGGCA GCCTCGGCGC CGAACTGATC
GCCAACGACA AACCGCTGGT CGTGCATTAC GACGGCGGCT GGTATTTCCC GGTCTTCAAA
CGCTACCCGG AAACCACCTT CGGCGGCGAA TTCCCCCTGG AAGCCAACTA CAAGAGCCCC
TACATCAGCC AACTGATCGC CGAGAAGGAC GGCTGGGTGC TTTGGCCGCC GATCCCCTAC
AGCTACGACA CCATCAACTA CGAGCTGAAG GTTCCCGCCC CCGCCCCGCC GTCGGCGGAA
AACTGGCTGG GCACCGACGA CCAAGCCCGC GACGTGCTCG CCCGGGTGAT TTACGGCTTC
CGCGTGTCGA TCCTCTTCGC CCTGACCCTG ACCGTGCTCA GTTCTCTGAT CGGCGTCACC
GTCGGCGCCC TGCAAGGCTA CTACGGCGGC TGGGTCGACC TGCTCGGCCA GCGTTTTCCT
GGAGTCTGGT CGGGGCTGCC GGTGCTCTAC CTGCTGATCA TCCTGGCCAG CTTCGTCCAG
CCGAACTTCT GGTGGCTGCT GGGCATCATG CTGCTGTTTT CCTGGATGAG CCTGGTGGAC
GTGGTCCGCG CCGAGTTCCT CCGCGGGCGT AACCTGGAAT ACGTCCGCGC CGCCCGGGCC
CTCGGCATGC GCAACAGCGC CATCATGTTC CGTCACATCC TGCCGAACGC GATGATCTCG
ACCCTGACCT TCATGCCGTT CATCCTCACC GGCGCCATCG GCACCCTCAC CTCCCTGGAC
TTCCTCGGCT TCGGCCTGCC GCCCGGCGCG CCGTCGCTGG GCGAGCTGGT CGCCCAGGGC
AAGTCCAACC TCCAGGCGCC CTGGCTGGGC ATTTCCGCCT TCGTGGTGCT GGCGGTCATG
CTGAGCCTGC TGGTGTTCAT CGGCGAAGCC GCCCGCGACG CTTTCGACCC GAGGAAATGA
 
Protein sequence
MRLSPINQRR WARFKSNKRG WWSLWLFLIL FVGSLGAELI ANDKPLVVHY DGGWYFPVFK 
RYPETTFGGE FPLEANYKSP YISQLIAEKD GWVLWPPIPY SYDTINYELK VPAPAPPSAE
NWLGTDDQAR DVLARVIYGF RVSILFALTL TVLSSLIGVT VGALQGYYGG WVDLLGQRFP
GVWSGLPVLY LLIILASFVQ PNFWWLLGIM LLFSWMSLVD VVRAEFLRGR NLEYVRAARA
LGMRNSAIMF RHILPNAMIS TLTFMPFILT GAIGTLTSLD FLGFGLPPGA PSLGELVAQG
KSNLQAPWLG ISAFVVLAVM LSLLVFIGEA ARDAFDPRK