Gene PA14_41140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_41140 
Symbol 
ID4383091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3668914 
End bp3669996 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content63% 
IMG OID639325865 
ProductABC transporter permease 
Protein accessionYP_791434 
Protein GI116049759 
COG category[R] General function prediction only 
COG ID[COG4174] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCCT ATATCCTGCG GCGCCTGCTG CTGATCGTCC CTACCCTGTT CGGCATCCTG 
CTGATCAACT TCATCATCAT CCAGGCCGCT CCCGGCGGTC CGGTGGAGCA GATGATCGCC
AAGCTGGAAG GCTTCGACGC CGCTTCCGGC GGCGCCACCG GACGCATCTC CGGCGGCGGC
GGCGAAGTCG CCGTGGCCGG CTCGCAATAC CGCGGCGCGC AAGGCCTGGA CCCGGAGCTG
GTGAAAGAGA TCGAGCGCAT GTACGGCTTC GACAAGTCGG CCCCCGAGCG CTTCATGATC
ATGCTGAAGA ACTACCTGCA CCTGGACTTT GGGCAGAGTT TCTTCCGCGA CGCCAAGGTC
ACCGACCTGA TCATCGAGAA ATTGCCGGTG TCGATCTCGC TCGGACTCTG GAGCACGCTG
ATCATGTACC TGGTGTCGAT CCCGCTGGGG ATCGCCAAGG CGGTCCGCCA TGGCAGCGTC
TTCGACATCT GGACCAGCTC GGCGATCATC GTCGGCTACG CCATTCCCGC CTTCCTCTTC
GCCATCCTGC TGGTGGTGCT GTTCGCCGGC GGCAGCTACT GGGACTGGTT CCCCCTGCGC
GGCCTGACCT CGAACAACTT CGACCAGCTC AGCCTCGGCG GCAAGGTACT CGACTATTTC
TGGCACCTGG CCTTGCCGGT AACCGCCCTG GTGATCGGCA ACTTCGCCAC CATCACGCTG
CTGACCAAGA ACAGCTTCCT CGACGAGATC GGCAAGCAAT ACGTGGTCAC CGCCCGCGCC
AAGGGCCTGA CCGAACGCCG CGTGCTCTAC GGGCACGTAT TCCGCAACGC CATGCTGCTG
GTGATTGCCG GCCTGCCGGC TGCGCTGCTG GGGATCTTCT TCACCGGTTC GCTGTTGATC
GAGGTGATCT TCTCCCTCGA CGGCCTCGGC CTGCTCAGCT TCGAAGCGGC GATGAACCGC
GACTACCCGG TGGTCTTCGG CACGCTGTTC ATCTTCACCC TGTTCGGGCT GGTCATGAAG
CTGATCAGCG ATATCGTCTA CACCCTGGTC GATCCGCGCA TCGACTTCGA GAACCGGGAG
TAA
 
Protein sequence
MLSYILRRLL LIVPTLFGIL LINFIIIQAA PGGPVEQMIA KLEGFDAASG GATGRISGGG 
GEVAVAGSQY RGAQGLDPEL VKEIERMYGF DKSAPERFMI MLKNYLHLDF GQSFFRDAKV
TDLIIEKLPV SISLGLWSTL IMYLVSIPLG IAKAVRHGSV FDIWTSSAII VGYAIPAFLF
AILLVVLFAG GSYWDWFPLR GLTSNNFDQL SLGGKVLDYF WHLALPVTAL VIGNFATITL
LTKNSFLDEI GKQYVVTARA KGLTERRVLY GHVFRNAMLL VIAGLPAALL GIFFTGSLLI
EVIFSLDGLG LLSFEAAMNR DYPVVFGTLF IFTLFGLVMK LISDIVYTLV DPRIDFENRE