Gene PA14_40250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_40250 
Symbol 
ID4382365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3587293 
End bp3588570 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content68% 
IMG OID639325795 
Productputative outer membrane protein precursor 
Protein accessionYP_791364 
Protein GI116049829 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.311034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGGC GCAGGCAGTA CGCGCGCAAG GGACGGCGGC ATGGGAAGGG AGCCATCTGG 
CTCCTTTCCC TGGGCCTGCC GATGTTCGCG TCGGCCATGC CCCTCGACCA GGCGGTCAGG
GCAGGGCTGG CGATCCACCC GGAAGTACGA TCCGCGATGG CCGAAGCGGA CCGCGCAGGC
ACCGAGGTGG AGATGGCCAA AGGGGGGTAC TACCCCTCCG TGACGATGTC CGGAGGGCCG
CAGGAGTTCG ACTTCGGCGA GATCGTCTAC GATCTCACCG CGTCGCAGAT GCTGTACGAC
TGGGGGCGGG TGACGAGCAA GGTCGACAGC GCCAGCGCGA CCCAGCGCAA GCTGTCCGAG
GCGGTGCTGG TGGCGCGCGA CGACGCGGCG CTGGATATCG TCGAGACCTA CCTCGACGTG
CTCGCCTCGG AGCGCCGGGT GGAGGTGGTG CGCGAACACA TCCTGCGCCT CGACGGCATC
CGCGAGATGA CCCAGGCGCG CGGCGGCGAC GGCTACGCCG ACCGCAGCGA GCTGGATCGC
GCCAATCTGG AACTGTCGCG GGCCCAGGAG CAGTTGTCGC TGGAGAAGGG CAACCTGCAG
GACGCGCGCA ACCAGTACGC GATCCTGGTC GGCCAGGAGC CCGCCGACCT GGTGGAGCCC
GAGCCGATGT CGCTGCAACG CTACCTGGCG GCCAGCGATA TGGCGCGGGT GATCCGCGAA
TCGCCTTTGC AGCGCAAGGC CCTGGAGGAC GCCAATGTCG CCGAGGCCGA GGTCCGCGAG
GCCAAGGCGT CGCTGCTGCC GCAACTGAAC CTGGAGGCCA GCGCGCTGCG CCGGGAGATC
GGCGGGCATC CGGAAAGCGA CTCGGTGGTA TCCCTGCGCT TCCGCATGGA CACCTTCCAG
GGGCTTTCCA ACTTCCGCCG GCCGACCGCC GCGCAGCAGC GCCTGGAATC GGCGAAATGG
AGCGCCGACG CGATGCAGCG CGACATCCGC CGGCAACTGC AGAACCTCTT CGACAACGGC
GACACGCTGC GCTGGCGGGA ACAGTCGCTG ACCCAGCAGG TGACCGAGTC GGAGCAGGTC
GGCGAGTTGT ATCGCGAACA GTTCGAGGTT GGCCGGCGCG ACGTGATCGA CCTGCTCAAC
GTGCAGCGCG AGCGGTTCGA GGCAGAGCGG CAACTGATCA ACCTGCGGAT CGAACGCAAG
CGCATCGAGT ATCGGGCGGC CGCGCAAGTC GGCCTGTTGG GTCCGCTATT GGAGAACCGG
CTGAATCATG GAAGCTGA
 
Protein sequence
MRGRRQYARK GRRHGKGAIW LLSLGLPMFA SAMPLDQAVR AGLAIHPEVR SAMAEADRAG 
TEVEMAKGGY YPSVTMSGGP QEFDFGEIVY DLTASQMLYD WGRVTSKVDS ASATQRKLSE
AVLVARDDAA LDIVETYLDV LASERRVEVV REHILRLDGI REMTQARGGD GYADRSELDR
ANLELSRAQE QLSLEKGNLQ DARNQYAILV GQEPADLVEP EPMSLQRYLA ASDMARVIRE
SPLQRKALED ANVAEAEVRE AKASLLPQLN LEASALRREI GGHPESDSVV SLRFRMDTFQ
GLSNFRRPTA AQQRLESAKW SADAMQRDIR RQLQNLFDNG DTLRWREQSL TQQVTESEQV
GELYREQFEV GRRDVIDLLN VQRERFEAER QLINLRIERK RIEYRAAAQV GLLGPLLENR
LNHGS