Gene PA14_39830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_39830 
Symbol 
ID4380233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3550519 
End bp3551670 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content67% 
IMG OID639325761 
Producthypothetical protein 
Protein accessionYP_791330 
Protein GI116049861 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.123723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA AAACCCTGCG CACCTGGTAC CTGGTGCACA AATGGACCAG CCTGATCTCC 
ACGATCTTCC TGCTGATGCT TTGCCTCACC GGGTTGCCGC TGATCTTCCA CGAGGAGATC
GAGCACTACT TCGAGCCGCA TCCGCAGCTC GAGCCGCTCA CTGCCGAGTC GCCGCGCATC
GACTACGACG ACGTGATCGC CCGCGCCCTG GCCGCCCGGC CGGGCGAAGT GGTGCGCTTC
CTGGTATTCG AAAAGGACGA CCCGCTGGGC CTGGTGATCA GCGCGCCGAG CCTGGTACCG
CCGCCGGAGA ACGGTCACAT GCAGCCGTTC GACGCGCGCA CCGGGGAATT CTTCGACGCG
CTGCCGCCGC CGGGCGGCTT CATGTACCTG ATGCTGAAGC TGCATACCGA CCTGTTCCTC
GGCCTGCCCG GCTACCTGTT CCTCGGCCTG ATGGGCCTGC TGCTGGTGGC CTCGCTGGTG
TCCGGGGTGG TGGTATACAC GCCGTTCATG CGCAAGCTGG ACTTCGCCAC GGTACGCGCC
GAACGCAGCC GTCGTCTGAA GTGGCTGGAC CTGCACAACC TGCTGGGCAT CGTCACCCTG
TCCTGGGTAC TGGTGGTCGG CGTGACCGGG GTGATCAACA CCCTGGCCCT GCCGATCCTG
ATGCTCTGGC AAGGCGGGCA GTTGGCGGAA ATGACCGCGC CCTACAAGGA CGCGCCACCG
CTACAGCGCC TCGGCTCGCT CGACGCGGCC CTGGCCACGG CACGCCGGGC GGCGCCGGAC
ATGGAGGTCA GCTTCGTCGG CTTCCCCGGC ACCCAGTTCA GCAGCCAGCA TCACTATGCG
GTGTTCATGC GCGGCAACAC GCCGCTCACC GAGCGCCTGC TGAAGCCGGC ACTGATCGAC
GCGCAGAGCG GCGAACTCAC CGACATGCGC GAGATGCCGC TGTACGTGAA GACGCTCCTG
CTGTCGCAGC CGCTGCACTT CGGCGACTAC GGCGGCATGC CGCTGAAGAT CGTCTGGGCG
CTGCTCGACC TCGTCAGCAT CGTCATCCTC GCCAGCGGTC TCTACCTCTG GCTCGGCCGA
CGCAAGACGC CATTGGAGAA GCGCCTGGCG GAACTGCCGG ACGGCAGCCT GGCGACGGAG
GGCAAGGCAT GA
 
Protein sequence
MTAKTLRTWY LVHKWTSLIS TIFLLMLCLT GLPLIFHEEI EHYFEPHPQL EPLTAESPRI 
DYDDVIARAL AARPGEVVRF LVFEKDDPLG LVISAPSLVP PPENGHMQPF DARTGEFFDA
LPPPGGFMYL MLKLHTDLFL GLPGYLFLGL MGLLLVASLV SGVVVYTPFM RKLDFATVRA
ERSRRLKWLD LHNLLGIVTL SWVLVVGVTG VINTLALPIL MLWQGGQLAE MTAPYKDAPP
LQRLGSLDAA LATARRAAPD MEVSFVGFPG TQFSSQHHYA VFMRGNTPLT ERLLKPALID
AQSGELTDMR EMPLYVKTLL LSQPLHFGDY GGMPLKIVWA LLDLVSIVIL ASGLYLWLGR
RKTPLEKRLA ELPDGSLATE GKA