| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_39320 |
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| Symbol | rbsC |
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| ID | 4385646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 3499822 |
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| End bp | 3500820 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639325723 |
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| Product | membrane protein component of ABC ribose transporter |
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| Protein accession | YP_791292 |
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| Protein GI | 116049899 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0640494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.430548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC CGACGTCTTC CGCTACCGCC GCCGCAGCGC CAACCCTGCG ACGCGGCAAC
TATTTCGGCC TGGGCACCTA CCTCGGCCTG GCCGGCGCGC TGCTGGCGAT GATCGCGCTG
TTCTCGGCGC TGAGCAGCCA CTTCCTCAGC TATGGCACCT TCCTCGCCAT CGCCAACCAG
ATCCCCGACC TGGTGGTGCT GGCGGTGGGC ATGACCTTCA TCCTGATCGT CGGCGGCATC
GATCTCTCGG TAGGTTCGGT GCTGGCCCTG GCGGCCTCGG CGGTAAGCCT GGCGACGCTC
GGCTGGGGCT GGGGCGTGCT GCCGGCGGCG ATGCTCGGGA TGGCCTGCGC GACCCTGGCC
GGCTGCGTCA CCGGTTCGAT CACGGTGGCC TGGCGGATTC CCTCGTTCAT CGTGTCCCTC
GGGGTGCTGG AGATGGCCCG TGGGCTGGCC TACCAGATGA CCGACTCGCG CACGGCCTAT
ATCGGCGACG CCTATGCCTG GCTGTCCAAT CCGCTGGCGT TCGGCATCTC GCCGGCCTTC
GTGATCGCCC TGCTGGTGAT GTTCGCCGCC CAGGCGGTGC TCACCCGCAC GGTGTTCGGC
CGCTACCTGA TCGGCATCGG CACCAACGAA GAAGCGGTGC GATTGGCCGG TGTGAACCCG
AAACCCTATA AGATTGCAGT ATTCGCCCTG ATGGGGCTGC TCGCCGGGTT GGCCGCGCTG
TTCCAGATCT CGCGTCTGGA AGCGGCCGAT CCCAACGCCG GGGTCGGCCT GGAACTCCAG
GTCATCGCCG CGGTGGTGAT CGGCGGCACC AGCCTGATGG GCGGGCGAGG TTCGGTGGTC
AGCACCTTCT TCGGCGTGCT GATCATTTCC GTATTGGCGG CGGGGCTGGC GCAGATCGGT
GCGTCGGAGC CGACCAAACG AATCATTACC GGGGCGGTGA TCGTGGTAGC GGTGGTGCTG
GATACCTACC GCAGCCATCG CGCCCGCAGA CAGGGCTGA
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| Protein sequence | MSDPTSSATA AAAPTLRRGN YFGLGTYLGL AGALLAMIAL FSALSSHFLS YGTFLAIANQ
IPDLVVLAVG MTFILIVGGI DLSVGSVLAL AASAVSLATL GWGWGVLPAA MLGMACATLA
GCVTGSITVA WRIPSFIVSL GVLEMARGLA YQMTDSRTAY IGDAYAWLSN PLAFGISPAF
VIALLVMFAA QAVLTRTVFG RYLIGIGTNE EAVRLAGVNP KPYKIAVFAL MGLLAGLAAL
FQISRLEAAD PNAGVGLELQ VIAAVVIGGT SLMGGRGSVV STFFGVLIIS VLAAGLAQIG
ASEPTKRIIT GAVIVVAVVL DTYRSHRARR QG
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