Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_39000 |
Symbol | |
ID | 4382771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3475025 |
End bp | 3476224 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639325697 |
Product | hypothetical protein |
Protein accession | YP_791266 |
Protein GI | 116049925 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00275655 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.388299 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGA ACAACACCGC CGTTCGCCGA ATCCTGCCGC TGACCCTGGC CTCGCTGGGT GCCCTGGGCG GCCTGCAACC GGCCGCCGCC GATATCCTGC TGTACGACAA GGACGAGACC ACCTTTTCCA CCGACGGCTA CTTCAATGCC TTCTACGTCA ACAGCGACGT CGACCGCCAG GGCGAGACCT ACGATCGCCG CCAGTCGCGG GTGAAGATGG GATTCCTGCC GAACTACATC GGCTTCAACT TCGGCAGGAA GGTCGACGAG CTGAGCCTCG GTGGTCGCGC TTCCTTCTGG GTGACCATCA ACGACAGCGA GACCGACGGC ACCGATACCG CCATCGACGT CCGTCAGTTC TACGGCACGG TCGCCGGCGA CTGGGGCGAG GTGCTGATCG GCAAGGACTT CGGCCTGTTC TCGCGCTCGA ACATCTTCCT CGACGAACTG CTGGCCGGTT TCGGCAACCC CAGCGACACC CTCGGCCTGG TGGACGGCAA GGGCGTCTCC TTCGGCAACA TCGGCACCGG CTATCCGTAT CCGTTCCCCA CCTCGCAGAT CACCTACCGC AACAACGACC TGCTGCCCGG CCTGCGCATC GCCGTGGGCA TCCTCGACCC GATCGACTCC AACCAGATCG ACAAAGATGC CAGCGACGGC CTCGACGACA AGGCCTACCA GGACAACCCG CGCTACGAGA GCGAGGTCAG CTACCAGTTC GACCTGGCTG GGGCGCAGGT CTACAGCTGG ATCAACGGCG GCTACCAGAC TTCGAAGAAC ACCAGCGACA GCGTCGACAG CGTGACTTCC AAGGGGGTCG GCTATGGCTT GCAGGTGAAG ATGGGCGGTT TCTCCGTGAC CGGTTCGGGG TTCACCGCCA AGGGCATCAA TCCCTTCTTC ACCAACAACG CCGGCGAAGC CGCGCTGCGC GAGGTGGACA GCCGCGGCGC ATTGCTGCAG GGCTCGTATT CATGGGGCAA GAACCGCCTG GCGCTGTCCT ACGGCAAGAC CGTCGACGAC GGCAACGGCC TGGGTTCCGC GGCCGACTAC GAGAGTCGCG GCATCGCCTA TTTCCGCACG ATCAACGACA ACCTCAAGCT GGTCGCCGAG CTGAACCGCT ACCGGATCGA CGGGCGCGAC GGTGCCGCGC TCGACGAGGA CACCGACACC GTGGCCCTCG GCGCCGTACT GAACTGGTGA
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Protein sequence | MNKNNTAVRR ILPLTLASLG ALGGLQPAAA DILLYDKDET TFSTDGYFNA FYVNSDVDRQ GETYDRRQSR VKMGFLPNYI GFNFGRKVDE LSLGGRASFW VTINDSETDG TDTAIDVRQF YGTVAGDWGE VLIGKDFGLF SRSNIFLDEL LAGFGNPSDT LGLVDGKGVS FGNIGTGYPY PFPTSQITYR NNDLLPGLRI AVGILDPIDS NQIDKDASDG LDDKAYQDNP RYESEVSYQF DLAGAQVYSW INGGYQTSKN TSDSVDSVTS KGVGYGLQVK MGGFSVTGSG FTAKGINPFF TNNAGEAALR EVDSRGALLQ GSYSWGKNRL ALSYGKTVDD GNGLGSAADY ESRGIAYFRT INDNLKLVAE LNRYRIDGRD GAALDEDTDT VALGAVLNW
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