| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_38570 |
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| Symbol | |
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| ID | 4380290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 3440271 |
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| End bp | 3441641 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639325665 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_791234 |
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| Protein GI | 116049956 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.1549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTGTTCGAGA TCGTCGAAGG CTCCAGCGAA GGCACGGTGA TCGTCGACCG CGAGGCCCGC
ATCGTCTGGA TCAACCAGCG CTACGCCCAG CGTTTCGGCC TCGCCGACCC GGCGCAGGCC
ATCGGCCGGC CCTGCGAAAG CGTGATCCCC GGTAGCCTGC TGCGCGAGGT GGTACGCAGC
GGCAAGCCGA TCCTGCTGGA CATGATGGAC AGCGCGAAGG ACCCGCTGGT GGTGATGCGC
CTGCCGATCC ACGACGACGC CGGCGAGGTG ATCGGCGCCA TCGGCTTCGC CCTGCTCGAC
GAACTGCGTT CGCTGTCGCC GCTGGTGACC CGCTACCTGA GCATGCAGCG CGAACTGGCC
TCGACCCGCT CGCAATTGCA GGCGCGCCAG GCCAAGTACA GCTTCAGCCA CTTCGTCGGT
ACCAGTCCGG CCAGCCTGGA AGTCAAGCGC CGCGCCCGCC GTGGCGCGGC CAGCGAAGCG
CCGGTGCTGT TGCTCGGCGA GACCGGTACC GGCAAGGAAC TGCTCGCCCA CGCCATCCAC
AGCGCTTCGC CGCGGGCGCA CAAGGCCTTC GTCAGCGTGA ACGCCGCGGC GATCCCGGAA
AGCCTGCTGG AGGCCGAATT CTTCGGTACC GCCCCGGGGG CCTTCACCGG TGCCGAGCGC
AAGGGCCGGC CAGGCAAGTT GCAGGTGGCC CAGGGCGGCA CGTTGTTCCT CGACGAGATC
GGCGACATGC CGCTGGCCTT GCAAGGCAAG CTGTTGCGCG TGCTACAGGA GAAAGAGTTC
GAAGCGGTGG GTTCCAACGA AGTGATCCGC AGCGACATCC GCCTGGTCGC CGCCACTTCC
ATCGACCTGC AGCAGGCGAT GCGCGAAGGC CGTTTCCGCG CTGACCTCTA CTACCGGCTG
AACGTCCTGC CGATCGAGAT CCCACCGTTG CGCCAGCGCC TGGACGACCT CCCGGCGCTC
TGCGAGTCGA TCCTCGACAG CCTCGACCAC GGCCGTCTCC ACGAACTCGG CGGCGACGCC
CTGGCGCTGC TCGCCCGGCA TGCCTGGCCG GGCAATGTTC GCGAACTGCG CAACGTGCTG
GAACGCGCGC TGCTGCTGGC CGACCAACCG TTGCTGGACG CCGCCGCCCT CGGCGCGGCG
CTCGGCCCCC TGCAACCGCT GCCGGAGCTG CCTCGAGCGG CGGACGACAG GCCGGTCGGG
GATTTCCAAC AGGCCCGCGA AGCCTTCGAG CGCGACCTGA TCGGACGGGC CCTGGCGCAG
AGTGCCGGCA ATGTGGTGGA AGCGGCGAAA CGCCTGGGCC TGGGTCGCTC GACCCTGTAC
AAGAAGATCG TGGCGCTGGG CATGCGTCTC GATAACGGGA CCCATCTCTA A
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| Protein sequence | MFEIVEGSSE GTVIVDREAR IVWINQRYAQ RFGLADPAQA IGRPCESVIP GSLLREVVRS
GKPILLDMMD SAKDPLVVMR LPIHDDAGEV IGAIGFALLD ELRSLSPLVT RYLSMQRELA
STRSQLQARQ AKYSFSHFVG TSPASLEVKR RARRGAASEA PVLLLGETGT GKELLAHAIH
SASPRAHKAF VSVNAAAIPE SLLEAEFFGT APGAFTGAER KGRPGKLQVA QGGTLFLDEI
GDMPLALQGK LLRVLQEKEF EAVGSNEVIR SDIRLVAATS IDLQQAMREG RFRADLYYRL
NVLPIEIPPL RQRLDDLPAL CESILDSLDH GRLHELGGDA LALLARHAWP GNVRELRNVL
ERALLLADQP LLDAAALGAA LGPLQPLPEL PRAADDRPVG DFQQAREAFE RDLIGRALAQ
SAGNVVEAAK RLGLGRSTLY KKIVALGMRL DNGTHL
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