Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_38360 |
Symbol | |
ID | 4380306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3419146 |
End bp | 3420507 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639325648 |
Product | putative nucleotide sugar dehydrogenase |
Protein accession | YP_791217 |
Protein GI | 116049972 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0121251 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCTAT GCGTGATTGG TGCGGGCTAT GTGGGACTGG TGACGGCGGC CTGTTTCGCC GAGATGGGCA ACCAGGTGCG CTGCGTGGAG CGCGACCGCG AGCGGGTCGC GCGGCTGAGA CGCGGCGAGA TGCCGATCTA CGAGCCGGGC CTGGAAAGCA TCCTGCGCGA TCAGCTGGAC GCCGCCCGCC TGACCTTCAC CGCCAGCCTG GCGGAAGGCC TGGCCGACGC CGAGGTGGTG TTCATCGCCG TCGGCACGCC GTGCGGCGAG GACGGCTCGG CCGACCTCAG CCACGTGATG GCGGTCGCCG AGCAACTTGG CGCGCAACTG CGCCAGGCCT GCATCGTGGT CAACAAGTCG ACCGTGCCGG TGGGCACCGC CGAACGGGTC GAAGAGATCA TCCGCCTGGG CCTGGCGCGC CGGCGCAAGC GCTTCCGGGT GGCGGTGGCG AGCAATCCGG AGTTCCTCAA GGAAGGCTCG GCGGTGGACG ACTTCAGGCG CCCGGACCGG GTCATCATCG GCAGCGCCGA GGCGCAGGCC GGGGAAACCC TGCGCCAGCT CTACGCGCCG TTCCTGCGCA ATCACGAACG GGTCCTGCTG ATGGGGCGCC GCGAGGCCGA GTTCAGCAAG TACGCGGCCA ATGCCTTCCT CGCCACCAAG ATTTCCTTCA TGAACGAGAT GGCCGGGCTG TGCGCCCTCA CCGGCGTCGA CATCGAGGAC GTGCGCCGTG GCATGGGCAG CGACAAGCGC ATCGGCACCC ATTTCATCTA CGCCGGCTGC GGCTACGGCG GCTCGTGCTT TCCCAAGGAC GTCCGCGCGC TGATCCGCAG CGCCGAGCAA CAGGGCTTCG ACAGCCAGAT ACTGCGTGCG GTGGAAGCGC GCAACGCGCG GCAGAAGGAA CTGCTCTTCG AGACCCTCGG CGAGCTGTTC CAGGGACGCT GGCAAGGGCG CACGGTGGCG CTCTGGGGGC TGGCCTTCAA GCCGGGTACC GACGACCTGC GCGAGGCGCC GAGCCTGGTC CTGCTGGAGG CGCTGCTGCG CCACGGGGTG CGGGTCAGGG CCCATGACCC GGTGGCCAAC GCCGGGGTCG CGGCACGCTA TCCGGACGCG CTGGCGTGCG CCCAGTTGAC GCTCCACGAC TCGCCCTACG CCGCCGTCGA GGGCGCCGAT GCCCTGGTGC TGGTGACCGA GTGGAAACAG TTCCGCCAGC CGGACTTCCA GAAAATCCGT GGATCCATGC GAACTCCCCT GTTGGTCGAC GGTCGGAATC TCTACGCACC GGCGCGGATG GCGGAACTGG GCTTCATCTA CCAGGGCATA GGACGTCCAA GGGCCGGGCA TTGTAAGGCG AGCGCAGCCT GA
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Protein sequence | MRLCVIGAGY VGLVTAACFA EMGNQVRCVE RDRERVARLR RGEMPIYEPG LESILRDQLD AARLTFTASL AEGLADAEVV FIAVGTPCGE DGSADLSHVM AVAEQLGAQL RQACIVVNKS TVPVGTAERV EEIIRLGLAR RRKRFRVAVA SNPEFLKEGS AVDDFRRPDR VIIGSAEAQA GETLRQLYAP FLRNHERVLL MGRREAEFSK YAANAFLATK ISFMNEMAGL CALTGVDIED VRRGMGSDKR IGTHFIYAGC GYGGSCFPKD VRALIRSAEQ QGFDSQILRA VEARNARQKE LLFETLGELF QGRWQGRTVA LWGLAFKPGT DDLREAPSLV LLEALLRHGV RVRAHDPVAN AGVAARYPDA LACAQLTLHD SPYAAVEGAD ALVLVTEWKQ FRQPDFQKIR GSMRTPLLVD GRNLYAPARM AELGFIYQGI GRPRAGHCKA SAA
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