Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_37430 |
Symbol | |
ID | 4385787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3331556 |
End bp | 3332065 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639325577 |
Product | RNA polymerase sigma factor |
Protein accession | YP_791146 |
Protein GI | 116050040 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.031593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGCC AAGGCTCCAT CAAGAACACC CTGATCGCCC AGTTGTTCCA GCAGAACTAC GACTGGCTGT GCAAGAAACT GTCCTACCAG ACCGGCTGTA GCCACAGCGC CGAAGACCTC GCCGCCGAAG CCTTCCTGCA GGTCTGGATG CTCCCCGACC CGGCGTCGAT CCGCTCGCCG CGGGCGTTCC TCGCGACCAT CGCGCAACGC CTGATGTACG AGAGCTGGCG GCGCAAGGAC CTGGAGCGCG CCTACCTGCA GATTCTCGCC GAGGCGCCGG AGGCGGTGCA GCCGTCGCCC CACGAACAGT GGATGCTGAT CGAGAGCCTG CAAGCCATCG ACCGCCTGCT CGACGGCCTG TCCGGGCAGG CCCGCGCGGT GTTCCTGATG AGCCAGCTGG AAGGCCTGAC CTACGTGCAG ATCGGCGAAC GCCTCGGATT GTCCCTGGGG CGCATCCACC AGTTGATGAA GGATGCCTTG CACTGCTGCT ACCGGGGATT CCAGGAATGA
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Protein sequence | MDSQGSIKNT LIAQLFQQNY DWLCKKLSYQ TGCSHSAEDL AAEAFLQVWM LPDPASIRSP RAFLATIAQR LMYESWRRKD LERAYLQILA EAPEAVQPSP HEQWMLIESL QAIDRLLDGL SGQARAVFLM SQLEGLTYVQ IGERLGLSLG RIHQLMKDAL HCCYRGFQE
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