Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_37120 |
Symbol | |
ID | 4385566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3307292 |
End bp | 3308224 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639325554 |
Product | LysR family transcriptional regulator |
Protein accession | YP_791123 |
Protein GI | 116050063 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0187077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGT TTGCCGAAAT GACCACCTTC GTCAGCGTGG TCGACGCCCG TAGCTTCTCC GAAGCCGCCC GCCGCCTGGG CACCACCAAG TCGCAAGTCA GCCAGCGTAT CCAGCAACTG GAGAGGCGCC TGGGCCGGGT GCTGCTGAAC CGCACCCGGC CGCTGAGCCT CACCGACCCC GGTCGCACCT ACTACGAACA CGCCTGCCGC CTGCTACAGG AGCTGGAGCA GGCGGAAGCC TCGGTGCTCG ACGCCGACGA CGACCTGCGC GGCCAGTTGC GCCTCTCCGC GCCGCTGGCC TTCACTCCGC GCTACCTGGC GCCGCTGCTG GCGCGCTTCG CCGAGCGCCA TCCGCAATTG CGGGTGGACG TGCAGGCCGA CGATCGTTTC GTCAACCTCC AGGAACCGCG CTTCGACATG GCCCTGCGCA TGGGCCGGCT GGACGACTCC TGCCTGGTGG CGCGGCCGAT CACCGCCAAC CGCCACCTGC TCTGCGCCAG TCCCGACTAC CTGGCGCGGC ATGGCGTGCC GCAGCATCCC GAGGAATTAC AGGCGCACGA CGGGCTGGTC TACTACAACC GCGAGCCCGG CGGCATGCTC TGTCTGCCGG TGGACGGCGA ACCGGCCTCG TTCCGCATCC GGGTGAGGAT GCGCACCGAC TCCGGGCACC AGTTGCTCGA AGGTGCGCGC GCCGGGCTCG GCCTGGCGAT CCTGCCGAGC TTCCTGGCCG CCGATGCCTT GCTGGCCGGC GAGCTGCTGC CGGTCCTGCC TGGCTACTCG CCGGACGGCG GGCAGGTTTC CGTGGTCTAC CGCAAGACCC AACGGACGCC CCGGAAGATC CTCGTCCTCG GCCAGTTCCT CGAAGAGGAA ATCGGCGATC CGGCGCCCTG GGACCGCGCG CTCATCGAGC GTGGCCTGTT GCCGCCGGGC TGA
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Protein sequence | MNKFAEMTTF VSVVDARSFS EAARRLGTTK SQVSQRIQQL ERRLGRVLLN RTRPLSLTDP GRTYYEHACR LLQELEQAEA SVLDADDDLR GQLRLSAPLA FTPRYLAPLL ARFAERHPQL RVDVQADDRF VNLQEPRFDM ALRMGRLDDS CLVARPITAN RHLLCASPDY LARHGVPQHP EELQAHDGLV YYNREPGGML CLPVDGEPAS FRIRVRMRTD SGHQLLEGAR AGLGLAILPS FLAADALLAG ELLPVLPGYS PDGGQVSVVY RKTQRTPRKI LVLGQFLEEE IGDPAPWDRA LIERGLLPPG
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