| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_35290 |
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| Symbol | gnd |
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| ID | 4380372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 3137263 |
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| End bp | 3139038 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639325402 |
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| Product | gluconate dehydrogenase |
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| Protein accession | YP_790971 |
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| Protein GI | 116050212 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0685157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.495861 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGA CACTCAAACC GGTGGACGCG GTGGTGGTCG GCTTCGGCTG GACCGGAGCG
ATCCTGGCCA AGGAGCTGAC CGAGGCCGGG CTCAACGTGG TGGCGCTGGA GCGCGGCGAG
AACCGCGATA CCTATCCCGA CGGCGCCTAC CCGAACACCC TCGACGAGCT GACCTACAAC
ACACGCGGCA AGCTGTTCCA GAATCTCTCC AAGAGCACCG TGAGCATCCG CCACGGGATC
AACGACACCG CGCTGCCCTA CCGTCAGCTC TCCGCCTTCC TTCCCGGCGA CGGCGTCGGT
GGCGCCGGCC TGCACTGGTC CGGCGTGCAT TTCCGGATCA TGCCCGAGGA ACTGCGCCTG
CGCAGTCACT ACGAGGAACG CTACGGCAAG AAATTCATCC CCGAAGGCAT GACCATCCAG
GACTACGGGG TCAGCTACGA AGAGCTGGAG CCGCACTTCG ATTTCGCCGA GAAGGTCTTC
GGCACCTCCG GCACCGCGCA TACGGTCAAG GGCCAGGTGG TCGGCAAGGG CAATCCGTTC
GCCGCCGACC GCTCGGACGA CTTCCCGCTG CCGGCGCTGC GCCAGGTGTA CTCCGCGCAA
CTGTTCCGCA AGGCCGCCGA GGAACTCGGC CTGCACCCCT ACGACCTGCC GGCGGCCAAC
GCTTCGGGGC CCTGGACCAA CCCCTACGGG GTGCAGATGG GGCCGTGCAA CTTCTGCGGC
TTCTGCAGCG GCTACGCTTG CTACATGTAT TCCAAGGCCT CGCCGAACCT GAACATCCTG
CCGGCGCTGC GCCAGACCCC GCTGTTCGAA CTGCGCGCCA ACTGCAACGT GCTCAAGGTC
AACCTCGACA GCGACGGCAG GCAGGCCACC GGCGTGACCT ACGTCGACGC CCAGGGGCGC
GAGATCGTGC AGCCGGCGAA GCTGGTGATC ATCAGTGCCT TCCAGTTCCA CAACGTGCGC
CTGCTGCTGC TCTCCGGCAT CGGCAAGCCC TATGACCCGC GCACCGGCGA GGGCGTGGTG
GGGAAGAACT TCGCCTACCA GAACATGGCC ACCATCAAGG CGTTCTTCGA CAAGGACGTG
CATACCAACC CCTTCGTCGG CACCGGCGGC GGCGGCGTGG CGGTGGACGA CTTCAACGCC
GACAACTTCG ACCACGGACC GCTGGGCTTC GTCGGCGGCT CGCCGATGTG GGTCAACCAG
GCCGGCTCCA AGCCGATCGG CGGCCTCGCC GTGCCGCCCG GCACGCCGAG CTGGGGCAGC
GGCTGGAAAC AGGCGGTCAA GGACGCCTAC ACGCACACCG TGTCGATGGA CGCCCACGGC
AGCAACATGA CCTACCGCGA CAACTACCTC GACCTCGACC CGACCTACAA GGACGCCTAC
GGCCAGCCAC TGCTGCGCAT GACCTTCGAC TGGAAGGACA ACGAGATCCG CATGAGCCGC
TACGTCACCG AGCACATGCG CAAGATCGCC GAGGCGATGA ACCCGAAGGC CATCTCGGTG
AGCGTCAAGA ACTTCGGCGA CCACTTCAAT ACACGGGTCT ACCAGACCAC CCACCTGCTC
GGCGGGGCGA TCATGGGCAG CGATCCGAAG ACCAGCGTGC TCAACCGCTA CCTGCAGAGC
TGGGACGTGC ACAATGTCTT CGTCATGGGC GCCTCGGCCT TCCCCCAGGG CACCGGCTAC
AACCCCACTG GGCTGGTGGC GGCGCTGGCC TACTGGTCGG CCAAGGCGAT CCGCGAGCAA
TACCTGAAGA ACCCCGGTCC GCTGGTGCAG GCATGA
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| Protein sequence | MATTLKPVDA VVVGFGWTGA ILAKELTEAG LNVVALERGE NRDTYPDGAY PNTLDELTYN
TRGKLFQNLS KSTVSIRHGI NDTALPYRQL SAFLPGDGVG GAGLHWSGVH FRIMPEELRL
RSHYEERYGK KFIPEGMTIQ DYGVSYEELE PHFDFAEKVF GTSGTAHTVK GQVVGKGNPF
AADRSDDFPL PALRQVYSAQ LFRKAAEELG LHPYDLPAAN ASGPWTNPYG VQMGPCNFCG
FCSGYACYMY SKASPNLNIL PALRQTPLFE LRANCNVLKV NLDSDGRQAT GVTYVDAQGR
EIVQPAKLVI ISAFQFHNVR LLLLSGIGKP YDPRTGEGVV GKNFAYQNMA TIKAFFDKDV
HTNPFVGTGG GGVAVDDFNA DNFDHGPLGF VGGSPMWVNQ AGSKPIGGLA VPPGTPSWGS
GWKQAVKDAY THTVSMDAHG SNMTYRDNYL DLDPTYKDAY GQPLLRMTFD WKDNEIRMSR
YVTEHMRKIA EAMNPKAISV SVKNFGDHFN TRVYQTTHLL GGAIMGSDPK TSVLNRYLQS
WDVHNVFVMG ASAFPQGTGY NPTGLVAALA YWSAKAIREQ YLKNPGPLVQ A
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