Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_34790 |
Symbol | |
ID | 4384352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3089196 |
End bp | 3090062 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639325363 |
Product | putative permease of ABC transporter |
Protein accession | YP_790932 |
Protein GI | 116050251 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.120138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0146992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGAG TCACGCGCGT CCGCGAAGAA TACGAAATCC AGCTCGAACC CCTGCTGGAG GTCCCCCTGG AGCGGCGCCT GCCCCTGGGC CAGCGTCTCT GGCAACAGGG CTGGCTGCGC AAGGGGCTGA TCCTGGCGCT GCTGGCGCTG GCCTGGGAGC TGGCGGCGCG GGTCCAGGGC AACGACCTGC TGCTGCCAGG CTTCCTGCAG ACGGCCAGGG CCCTCGGCGA GGGCCTGGCC AGCGGCGAAC TGCCGGCCAA GGCGGGGATC TCCCTGCTGG TGCTGTTCAA GGGCTACCTG CTGGGGATCG TCCTGGCCTT CGTTCTGACC AGCCTGGCGG TCTCCACGCA GTTGGGCCGC GACCTGCTCG GGACCCTCAC GGCGATGTTC AACCCGCTGC CGGCGATCGC GCTGCTGCCG CTGGCGCTGC TCTGGTTCGG CCTGGGCCAG AACAGCCTGA TCTTCGTGCT GGTGCATTCG GTGCTCTGGG CGCTGGCGCT GAACACCTAT GCCGGTTTCC TCGGTGTCTC GGAGACCCTG CGCATGGCCG GGCGCAACTA CGGCCTGCGC GGCCTGCGCT TCGTCCTGCT GATCCTGGTG CCGGCGGCGC TGCCGTCGAT TCTCGCCGGG CTGAAGATCG GCTGGGCCTT CGCCTGGCGC ACGCTGATCG CCGCGGAACT GGTGTTCGGC GCGAGCAGCG GCAAGGGCGG GCTCGGCTGG TACATTTTCC AGAACCGCAA CGAGCTGTAC ACCGACAAGG TATTCGCCGG CCTGGCGGTG GTGGTGCTGA TCGGCCTGCT GGTGGAGAAC CTGGTGTTCG GCAGCATCGA GCGCCTCACG GTGAAGCGCT GGGGAGTGCA ACGCTAG
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Protein sequence | MSRVTRVREE YEIQLEPLLE VPLERRLPLG QRLWQQGWLR KGLILALLAL AWELAARVQG NDLLLPGFLQ TARALGEGLA SGELPAKAGI SLLVLFKGYL LGIVLAFVLT SLAVSTQLGR DLLGTLTAMF NPLPAIALLP LALLWFGLGQ NSLIFVLVHS VLWALALNTY AGFLGVSETL RMAGRNYGLR GLRFVLLILV PAALPSILAG LKIGWAFAWR TLIAAELVFG ASSGKGGLGW YIFQNRNELY TDKVFAGLAV VVLIGLLVEN LVFGSIERLT VKRWGVQR
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