Gene PA14_34790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_34790 
Symbol 
ID4384352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3089196 
End bp3090062 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content69% 
IMG OID639325363 
Productputative permease of ABC transporter 
Protein accessionYP_790932 
Protein GI116050251 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.120138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0146992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGAG TCACGCGCGT CCGCGAAGAA TACGAAATCC AGCTCGAACC CCTGCTGGAG 
GTCCCCCTGG AGCGGCGCCT GCCCCTGGGC CAGCGTCTCT GGCAACAGGG CTGGCTGCGC
AAGGGGCTGA TCCTGGCGCT GCTGGCGCTG GCCTGGGAGC TGGCGGCGCG GGTCCAGGGC
AACGACCTGC TGCTGCCAGG CTTCCTGCAG ACGGCCAGGG CCCTCGGCGA GGGCCTGGCC
AGCGGCGAAC TGCCGGCCAA GGCGGGGATC TCCCTGCTGG TGCTGTTCAA GGGCTACCTG
CTGGGGATCG TCCTGGCCTT CGTTCTGACC AGCCTGGCGG TCTCCACGCA GTTGGGCCGC
GACCTGCTCG GGACCCTCAC GGCGATGTTC AACCCGCTGC CGGCGATCGC GCTGCTGCCG
CTGGCGCTGC TCTGGTTCGG CCTGGGCCAG AACAGCCTGA TCTTCGTGCT GGTGCATTCG
GTGCTCTGGG CGCTGGCGCT GAACACCTAT GCCGGTTTCC TCGGTGTCTC GGAGACCCTG
CGCATGGCCG GGCGCAACTA CGGCCTGCGC GGCCTGCGCT TCGTCCTGCT GATCCTGGTG
CCGGCGGCGC TGCCGTCGAT TCTCGCCGGG CTGAAGATCG GCTGGGCCTT CGCCTGGCGC
ACGCTGATCG CCGCGGAACT GGTGTTCGGC GCGAGCAGCG GCAAGGGCGG GCTCGGCTGG
TACATTTTCC AGAACCGCAA CGAGCTGTAC ACCGACAAGG TATTCGCCGG CCTGGCGGTG
GTGGTGCTGA TCGGCCTGCT GGTGGAGAAC CTGGTGTTCG GCAGCATCGA GCGCCTCACG
GTGAAGCGCT GGGGAGTGCA ACGCTAG
 
Protein sequence
MSRVTRVREE YEIQLEPLLE VPLERRLPLG QRLWQQGWLR KGLILALLAL AWELAARVQG 
NDLLLPGFLQ TARALGEGLA SGELPAKAGI SLLVLFKGYL LGIVLAFVLT SLAVSTQLGR
DLLGTLTAMF NPLPAIALLP LALLWFGLGQ NSLIFVLVHS VLWALALNTY AGFLGVSETL
RMAGRNYGLR GLRFVLLILV PAALPSILAG LKIGWAFAWR TLIAAELVFG ASSGKGGLGW
YIFQNRNELY TDKVFAGLAV VVLIGLLVEN LVFGSIERLT VKRWGVQR