| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_34770 |
|---|
| Symbol | |
|---|
| ID | 4384354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 3087301 |
|---|
| End bp | 3088323 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639325361 |
|---|
| Product | putative ABC transporter, periplasmic binding protein |
|---|
| Protein accession | YP_790930 |
|---|
| Protein GI | 116050253 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.429191 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.0167014 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCA TTCCCCGTTT CACCCGCCTG GTCGCCGCGC TCGGCCTGGG CCTGAGCCTC
GCCACCACGC TGCTGGCCAG CCGGCCGGCG CAGGCCGAGG GCGAGATCCG CATCGCCGAG
CAGTTCGGCA TCGTCTACCT GCTGCTCAAC GTGGTCCGCG ACCAGCGCCT GATCGAAAAG
CACGGCCAGG CCGAGGGCCT GCAAATCAAG GTCGACTGGA CCCAACTGTC CGGCGGCGCG
GCGGTCAACG ATGCGCTGCT GTCCGGGGCG ATCGATATCG CCGGTGCCGG CGTCGGTCCG
CTGCTGACCA TCTGGGACCG TACCCGCGGG CGCCAGAACG TCAAGGCGGT GGCCTCGCTG
GGCAACTTCC CCTACTACCT GCTGAGCAAC GACCCGCGGG TCAGGAGCAT CGCCGACTTC
GGCGCCGGGG ATCGCATCGC CGTGCCGGCG GTGGGGGTTT CGGTGCAGTC GCGCTTCCTC
CAGTACGCCG CGGCGAAGCA GTGGGGCGAC AAGCAGTTCG ACCGCCTCGA CAAGTACACC
GTGGCGCTGC CGCACCCGGA CGCCACCGCC GCGCTGGTGG CCGGCGGCAC CGAGCTGACC
GGGCATTTCT CCAACCCGCC GTTCCAGGAC CAGGCGCTGG CCAACCCGAA GGTCCACGTG
GTGCTCGACA GCTACGAGCT GTTGGGGCCG AATTCGCCGA CCGTGCTGTT CGCCACGGAG
AAGTTCCGCC AGGACAACCC GAAGACCTAC CGGGCCTTCG TCGAGGCGCT GAAGGAAGCG
GCGGCCTTCG CCCAGAACGA CAAGGCGGCG GCCGCCGATA CCTATATCCG GGTGACCGGG
GCGAAGATCG ACCGCGCCGC GCTGCTGAAG ATCATCGCCA ATCCGCAGGT GGAGTTCAGC
GTCACGCCGA AGAACACCTA TCCGCTGGCG GAGTTCCTCT ACCGGGTCGG TGCGATCCGC
AACAAGCCGG CTTCCTGGCA GGACTATTTC TTCCAGGACG GCGCGCCGTT GCAGGGGAGT
TGA
|
|---|
| Protein sequence | MNRIPRFTRL VAALGLGLSL ATTLLASRPA QAEGEIRIAE QFGIVYLLLN VVRDQRLIEK
HGQAEGLQIK VDWTQLSGGA AVNDALLSGA IDIAGAGVGP LLTIWDRTRG RQNVKAVASL
GNFPYYLLSN DPRVRSIADF GAGDRIAVPA VGVSVQSRFL QYAAAKQWGD KQFDRLDKYT
VALPHPDATA ALVAGGTELT GHFSNPPFQD QALANPKVHV VLDSYELLGP NSPTVLFATE
KFRQDNPKTY RAFVEALKEA AAFAQNDKAA AADTYIRVTG AKIDRAALLK IIANPQVEFS
VTPKNTYPLA EFLYRVGAIR NKPASWQDYF FQDGAPLQGS
|
|---|
| |