Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_34700 |
Symbol | |
ID | 4384360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3081983 |
End bp | 3083158 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639325355 |
Product | putative beta lactamase |
Protein accession | YP_790924 |
Protein GI | 116050259 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00182422 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.248771 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGGTT TCGAACGAGG GCCAGGGCGC AGCCTGGCGG AACATGTCGA TCAGGCGATC GAGGCGGCAT TCGCCGACCA GCGCCTGGTG GGAGCGGTGG TACTGGTGGC GCACCGGGGG CAGTGGCTCT ATCGACGGGC TGCCGGCCTG GCCGACCGCG AGGCCGGCCG GACAATGGGC GAGGACAGCC TGTTCCGCCT GGCCTCGGTG AGCAAGCCGA TCGTCAGCGT CGCCGCCCTG AGCCTGGTGG ACGAGGGCCG GCTGGCCCTC GACGAGCCGA TCGCCGACTG GTTGCCGGCG TTCCGTCCGC GCCTGGCCGA CGGCCGCGAG GCGCGCATCA CGCCGCGGCA GTTGCTGAGT CACAGCGCCG GCCTCGGTTA TCGCTTCCTC GAAGCCGACG CAGACGGCCC CTATGCCCGC GCCGGGATTT CCGACGGCAT GGACCTGCCG GGTTTCGACC TGGCCGAGAA CCTCCGTCGC CTGGCCTCCG TGCCCTTGCT CTACGAGCCC GGCCGCGCCT GGGGCTATTC GCTGGCCACC GACGTGCTCG GCGCGCTGGT GGCGCGGGTC GACGGGCGGC CGCTGGCGGA AGCGCTGCGG CAGCGGGTCG GGATTCCGGC CGGCATGCGC GACAGCGGCT TCCTCTGCGC CGACGCGCAA CGCCTGGCGG CGGTCTACGT CAGCGACCGG CCACGCCCGC GGCGGATGGC CGAGCGGGAG ACCGTCACGC CGTTCGAGGA CTGCGTCGGC ATTCGCTTCG AGCCGCGTCG GGCCTTCGAA CCGTCTGCCT ATGCGTCCGG CGGGGCGGGG ATGATCGGCA GCGCCGGCGA CGTGCTGCGC CTTTTGGAAA TCCTTCGCCA GGGCGGCGCG CCGTTGTTGA CGCCTGGCCT GGTGGAGGAG ATGGGCCGCG ACCAGGTACC CGGCCTGGAA CTGCGGGCCA ATCCCGGTTT CGGCTTCGGC CTGGGCTTCT CCGTGCTGCG CGACCCGGCC ATCGCGCAAT CGCCGGAGTC TCCCGGCACC TGGCGCTGGG GCGGCGCCTA CGGGCATTCC TGGTTCGTCG ACCGGGCCCG CGAACTGTCG GTGGTGGCGC TCACCAACAC CCTGTTCGAG GGCATGTCAG GACGCTTCGT CAACGACCTG CGCGACGCCG TCTACCGTTC CGCGGAGGTG CGCTGA
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Protein sequence | MSGFERGPGR SLAEHVDQAI EAAFADQRLV GAVVLVAHRG QWLYRRAAGL ADREAGRTMG EDSLFRLASV SKPIVSVAAL SLVDEGRLAL DEPIADWLPA FRPRLADGRE ARITPRQLLS HSAGLGYRFL EADADGPYAR AGISDGMDLP GFDLAENLRR LASVPLLYEP GRAWGYSLAT DVLGALVARV DGRPLAEALR QRVGIPAGMR DSGFLCADAQ RLAAVYVSDR PRPRRMAERE TVTPFEDCVG IRFEPRRAFE PSAYASGGAG MIGSAGDVLR LLEILRQGGA PLLTPGLVEE MGRDQVPGLE LRANPGFGFG LGFSVLRDPA IAQSPESPGT WRWGGAYGHS WFVDRARELS VVALTNTLFE GMSGRFVNDL RDAVYRSAEV R
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