Gene PA14_34550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_34550 
Symbol 
ID4380390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3070920 
End bp3072155 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content70% 
IMG OID639325345 
Producthypothetical protein 
Protein accessionYP_790914 
Protein GI116050269 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0698049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAC TGGAAAAGAA CGCCGCCGAT CCCTATCGGC AACCGCTGCC ACGGACCCCG 
GCCCGGCGCA TCGCCGACGA CGCCGAAGCG ATCCGCGTCG CCCGCGAACT GGCCGGGCTG
TTCGCCGAGG AAGCCTCGCT GCGCGACCGC CAGCGCCGGC TGCCGGTGGC CGAACTGGAA
GCCTTCTCGC AGAGCGGCCT ATGGGGCATC AGCGTACCGC GCGCCTACGG CGGCGCCGAG
GTCGGCTACC GGACCCTGGC CGAAGTACTG AAGACCATCG CCGCGGTAGA CCCGTCCCTG
GCGCAGTTGC CGCAGAACCA CCTGGCGGTG CTCGACCATT TGCGCCTGGA CGGCAGCGAG
GAGCAGAAAC GCTTCTTCTA CGGCCTGGTG CTAGACGGCG TGCGCTTCGG CAACGCCTTC
TCCGAACGCC ACAGCCGTAC CGTCGCCGAA TTCCAGACAC GAGTGCTGGC GGATGGCGAC
GGGTTCCGCA TCGACGGCCG CAAGTTCTAT TCGAGCGGCG CCCTGCTCGC CCACTGGGTA
CCGGCCGTCG GCCTCGACGC CGAGCAGCGC GCGCACCTGG CGTTCATCCC GCGCGACGCG
CCGGGGCTGA CGGTGATCGA CGACTGGTCC GGCTTCGGCC AGCGCACCAC CGCCAGCGGC
ACCGTCATCC TGGACAACGT GCGGGTGCCG GCCGAGCACG TCATCCCGGT GCACCGCGCC
TTCGACCGCC CCACCGCCGC CGGCGCCGTA TCGCAGTTCA TCCAGGCCGC CATCGACGCC
GGCATCGCCC GTGGCATCCT CGCCGAGACC GTGCAGCAGG TGCGCCGCCA CGCGCGGCCA
TGGATAGACG CCAACCAGCA GCATGCCTGG GAAGACCCCT ACACCATCCA GCAGGTCGGC
GACCTGCGCA TCCGCGTGCG CGCCGCGGAA GCCGTGCTCG ACCTGGCGGC CGACGCCATC
GAAGCGGCGC TCGCCGCCCC CGACGAGGAG AGCGTGGCCG CCGCCTCGAT CGCCGTGGCC
GAGGCCAAGG TGCTCACCAC CGAAGCCGCC CTGCTCGCCG CCAACCGGCT GTTCGAACTG
GCCGGCACGC GCTCGACCCT GGAGGAACTC AATCTCGACC GCCACTGGCG CAACGCCCGC
ACCCACACCC TGCATGACCC GGTGCGCTGG AAATACCATG CCATCGGCAA CTACCAGTTG
AATGGGGTGA AGCCACCGCG GCACGCCTGG CTCTAG
 
Protein sequence
MSALEKNAAD PYRQPLPRTP ARRIADDAEA IRVARELAGL FAEEASLRDR QRRLPVAELE 
AFSQSGLWGI SVPRAYGGAE VGYRTLAEVL KTIAAVDPSL AQLPQNHLAV LDHLRLDGSE
EQKRFFYGLV LDGVRFGNAF SERHSRTVAE FQTRVLADGD GFRIDGRKFY SSGALLAHWV
PAVGLDAEQR AHLAFIPRDA PGLTVIDDWS GFGQRTTASG TVILDNVRVP AEHVIPVHRA
FDRPTAAGAV SQFIQAAIDA GIARGILAET VQQVRRHARP WIDANQQHAW EDPYTIQQVG
DLRIRVRAAE AVLDLAADAI EAALAAPDEE SVAAASIAVA EAKVLTTEAA LLAANRLFEL
AGTRSTLEEL NLDRHWRNAR THTLHDPVRW KYHAIGNYQL NGVKPPRHAW L