Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_33990 |
Symbol | |
ID | 4380432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3021340 |
End bp | 3023889 |
Gene Length | 2550 bp |
Protein Length | 849 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639325303 |
Product | putative ClpA/B-type protease |
Protein accession | YP_790872 |
Protein GI | 116050311 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000016123 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0826946 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTCG CCGCCCTGAT CGGCCGCCTC AACCCGGACT GTCGCCGCGC CTTGGAGCGC GCCGCGCAAC GCTGCCTGCA ACGCACCCAT CATTACGTAG AGATCGAGCA CCTGCTGCTG GAGCTGCTGG ACATCGACGG CGGCGACTTC GCCTGCCTGC TGCCGCGCTT CGGCCTGGAG CGCGACGCCC TGGTCGCCGA GATCAACCTG TCGCTGGAGC TGTTCAAGGC CGGCAATACC CGCACTCCGG CGCTGTCCGC GCACACCATC GGCCTGCTCG AGGACGCCGT GGTCCACGCC AGCGTGCTCG GCCAGGCGCA GATCCGTTCC GGCCTGCTGC TGCTCGCCCT GCTCGACCGC GAGGAGCGCC GCGCCCTGCT GCTGAACAGC GCGTCGTCGC TACTGCGGAT TCCCCACGAG GCCTTGCAGG CCAACCTGCT GGAGTGGATC CAGACCTCCC GCGAACAGCC GCCCGCGCCG AACCGCCCGG CGGCAGGCGG CGACAAGCCG GAAAGCGCCC CGGACCCGCT GCTCGACCAG TACACCCAGG ACCTCACCGC CGAAGCCCGC GCCGGGCGCA TCGACCCCAT AGTCGGGCGC GACGGGGAGA TCCGCCAGTG CGTCGACATC CTCCTGCGCC GGCGGCAGAA CAACCCGATC CTGGTCGGCG CGCCGGGCGT CGGCAAGACC GCGGTGGTCG AGGGCCTGGC CCTGCGCATC GCCGCCGGCG AAGTGCCGCC GTCGTTGCAG GAGGTGATCC TGCGGGTGCT CGACCTCGGC CTGTTGCAGG CCGGCGCCAG CATGAAGGGC GAGTTCGAGC AGCGCCTCAA GGGCGTGATC GACGCCGTGC GCAACAGCGC GCAGCCGATC ATCCTGTTCA TCGACGAGGC GCACACGCTG ATCGGCGCCG GCGGCGCAGA AGGCGGCAGC GACGCCGCCA ACCTGCTCAA GCCGGCCCTG GCGCGCGGCG AGTTGCGCAC CCTGGCGGCC ACCACCTGGC TGGAATACAA GAAATACTTC GAGAAGGACC CGGCGCTGAC CCGGCGCTTC CAACTGGTCC AGGTCGAGGA GCCGGACGAG GCCACCGCCG TGGAGATGCT GCGCGGCGTC GCCGGCAAGC TGGAACAGCA TCACGGCGTG CAGATCATGG ACGCGGCCAT CGTCGATGCG GTGAAGCTGT CGCACCGCTA CATCTCCGGC CGCCAGTTGC CGGACAAGGC GATCAGCGTG CTCGACACCG CCTGCGCGCG GGTCGCCCTC GGCCAGCACG ACGTGCCGCC GCCGCTGGAA AGCCTGCGCC ACCGCGAGCA GGCGCTGGAA GAGGAATTGC AGCGGCTGCG CCGGGAACAG GCCACCGGCC TCGACCACAG CGCGCGTATC ACCGCCCTGG AAAGCGAGTC GGGCGATAAC CGCCGGACCA TCCGCGAGCT GGAGACCCGC TGGGACGAGG AACGCGAAGC GGTGCGCGAA CTGCTCGACA CCCGCCGCGA ATTGCTGGCC CTCAGCGAAA GCGCCGACGC GGCCAAGCCC GACGAGGAAC TGGACGGTCG CATCGACCAC CTGGCCGCCG AACTGGCGCG CCTGGCGGCC GGCCTCGAAG CCATCCGCCA GGACGACCCG CTGGTTCCCG AGCAGGTGGA CTCGCGTACC GTGGCCGCGG TGATCGCCGG CTGGACCGGC ATCCCGGTGG GCAAGATGCT CGCCGACGAA GCCCACGCCA TCCGTTCCCT GGCGCAACGA ATGGGCCAGC GGGTGATGGG CCAGGAGGCC GCCCTGGGCG CCATCGCCCA GCGCATCCAG GCCTATCGCG CCGGACTCAG CGACCCGGCC AAGCCGGTCG GCGTATTCCT CCTGCCCGGC CCCACCGGCG TGGGCAAGAC CGAGACCGCC TACGCCCTGG CCGACGCCCT CTACGGCGGC GAACGCAACC TGATCAGCAT CAACCTCTCC GAGTACCAGG AGGCCCACAC CGTCAGCCAG CTCAAGGGCG CCCCGCCCGG CTACGTCGGC TACGGCAGTG GCGGCGTGCT CACCGAAGCG GTGCGCCGCA AGCCCTATTC GGTGGTGCTG CTGGACGAGA TCGAGAAAGC CCATCCGGAC GTGCTGGAAG CCTTCTACAA CGTGTTCGAC AAGGGTGTGA TGGAAGACGG CACCGGCCTG GTGGTGGACT TCAGGAACAC CGTGATCCTC GCCACCAGCA ACGTCGGCGC CGAACTGCTG CTGGACAGCC CGGCCGAACA GGTCGCCACC CCGGCCTTCG ACGAGCGCCT GCGCAAAGTC TTGCTGCAAA CCTTCCGCCC GGCGTTCCTC GCGCGCATGA CCGTGGTGCC TTACCGGCCG CTGGAGGAAG CCACCCTGGA AGGCATCGTC GTGGCCAAGC TGGAAAAACT GCGGGAACGC TACAAGGCCG CTACCGGCAA ACAGTTCGAC TTCGACCCGG CCATCGTCAA GGCCGTGCTC GCCAAGTGCA GCGCGGCGGG CGCGCGGGAT ATCGAGAACG TGCTGATGGC GCAGGTGACG GGGAAGTTGG CGGAGTGGGT ACTCGAATGA
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Protein sequence | MELAALIGRL NPDCRRALER AAQRCLQRTH HYVEIEHLLL ELLDIDGGDF ACLLPRFGLE RDALVAEINL SLELFKAGNT RTPALSAHTI GLLEDAVVHA SVLGQAQIRS GLLLLALLDR EERRALLLNS ASSLLRIPHE ALQANLLEWI QTSREQPPAP NRPAAGGDKP ESAPDPLLDQ YTQDLTAEAR AGRIDPIVGR DGEIRQCVDI LLRRRQNNPI LVGAPGVGKT AVVEGLALRI AAGEVPPSLQ EVILRVLDLG LLQAGASMKG EFEQRLKGVI DAVRNSAQPI ILFIDEAHTL IGAGGAEGGS DAANLLKPAL ARGELRTLAA TTWLEYKKYF EKDPALTRRF QLVQVEEPDE ATAVEMLRGV AGKLEQHHGV QIMDAAIVDA VKLSHRYISG RQLPDKAISV LDTACARVAL GQHDVPPPLE SLRHREQALE EELQRLRREQ ATGLDHSARI TALESESGDN RRTIRELETR WDEEREAVRE LLDTRRELLA LSESADAAKP DEELDGRIDH LAAELARLAA GLEAIRQDDP LVPEQVDSRT VAAVIAGWTG IPVGKMLADE AHAIRSLAQR MGQRVMGQEA ALGAIAQRIQ AYRAGLSDPA KPVGVFLLPG PTGVGKTETA YALADALYGG ERNLISINLS EYQEAHTVSQ LKGAPPGYVG YGSGGVLTEA VRRKPYSVVL LDEIEKAHPD VLEAFYNVFD KGVMEDGTGL VVDFRNTVIL ATSNVGAELL LDSPAEQVAT PAFDERLRKV LLQTFRPAFL ARMTVVPYRP LEEATLEGIV VAKLEKLRER YKAATGKQFD FDPAIVKAVL AKCSAAGARD IENVLMAQVT GKLAEWVLE
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