Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_33690 |
Symbol | pvdE |
ID | 4380459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2988709 |
End bp | 2990358 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639325276 |
Product | pyoverdine biosynthesis protein PvdE |
Protein accession | YP_790845 |
Protein GI | 116050338 |
COG category | [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00697095 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.00612682 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCAATC CCAAGCGCGG CGCCATTCGC GAACTGCTCG CCCTGCTCAG GCCCTTTCGA GCGATCGTGG CCGTCTCCAT AGCACTGGGC ATGGCCGGCG GCCTTGCCAT CACCCTGCTG CTGGCCAGCA TCAACAACGC CTTGCACTCG GAAAACGGCC TCGGCCAAGG CGTCCTGCTG TCGTTCGGCG GACTCTGCCT GCTGGCATTG GTCAGTTCGA TCGTCTCCGA CATCGGTACC AGCTACGTCG GCCAACACAT CATCGCGAAG CTGCGCAAGG AACTCGGCGA GAAAGTCCTC TCGGCGCCCA TCGAGCAGAT CGAGCGCTAC CGGACCCACC GTCTCATTCC GGTACTGACA CACGACATTG ACACCATCAG CGACTTCTCC TTTTCCTTCA CCCCACTGGC CATAGCCCTG ACCATCACTT TCGGCTGCCT GGGTTACCTC GCCTACCTAT CGGTCCCGAT GTTCCTGCTG ACAGTCGTCG CCATCGTCAT CGGCACGGCA GCCCAGTACC TGGCGCGCTC CCGCGGTTTC AAAGGGTTCT ATGCCGCCCG CGATCTCGAA GACGAATTGC AGAAGCACTA CACCGCCATC GCTTCGGGCG CGAAGGAACT GCGCATCCAC CGCCCCCGTC GCTATCGCAT GCACACCGGC CGCATCAGCG AAACCGCGAA CAACATCCGC GACCTCCACA TCAGCTCCAT CAATATATTC ATCCTGGCCA AGACCTTCGG CTCGATGCTG TTCTTCGTGG TGATCGGTCT GGCGCTTACG CTCCAGGCCT ACTGGCCTTC GTCCAATCCG GCCGCCATCA CTGGCTTCGT GATGGTCCTG CTGTACATGA AGGGACCACT CGAACAGGTG GTGACCATCC TTCCCATCGT CAGCCGCGCC CAGGTCGCCT TCCAGCGGGT CGCCGAACTT TCCGAGCGTT TTTCCTCTCC CGAACCCCAT CTTCTGCTCA GCGAACAGGA GGCCCCGGAC AAGACCGTCG ACAGCCTGGA ACTGCGCGAC GTTCGCTACA GCCCCCCCGC CGTCGAAGGC AGCGAACCGT TCCATCTGGG CCCTATCAAT CTGCGTATCG CCCAAGGTGA CATCGTCTTC ATCGTCGGCG AGAACGGCTG CGGCAAGACG ACCCTGATCA AGCTGCTGCT CGGCCTCTAT CGCCCGCAGT CCGGCGAGAT CCTTCTCAAC GGAGAACCGG TCAGCGCGGA GACCCGCGAC GATTACCGCC AGCTCTTCAG CACCATCTTC GCCGACTACT ACCTCTTCGA CGACCTGGTC CAGGGCAAGC AGGCTTCGTT GCAGAACGCG ACCCAATATC TGCAACGCCT GGAAATCGCC CACAAGGTCA GCGTCATGGA CGGCAACTTC AGCACCACCG ATCTCTCCAC CGGGCAGCGC AAGCGCCTTG CGCTGATCAA TGCCTGGCTC GAAGAGCGGC CGGTCCTGGT CTTCGACGAA TGGGCCGCAG ACCAGGACCC GGCTTTCCGC AGGGTCTTCT ACACCGAACT GTTGCCGGAC CTGAAGCGCC AGGGCAAGAC CATCATCGTG ATCAGCCACG ATGATCGCTA TTTCGAAATG GCGGACCAGT TGATAAGGCT CTCGGCAGGC AAGGTCGTCA AGGAAACCGA GACGGCGTGA
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Protein sequence | MTNPKRGAIR ELLALLRPFR AIVAVSIALG MAGGLAITLL LASINNALHS ENGLGQGVLL SFGGLCLLAL VSSIVSDIGT SYVGQHIIAK LRKELGEKVL SAPIEQIERY RTHRLIPVLT HDIDTISDFS FSFTPLAIAL TITFGCLGYL AYLSVPMFLL TVVAIVIGTA AQYLARSRGF KGFYAARDLE DELQKHYTAI ASGAKELRIH RPRRYRMHTG RISETANNIR DLHISSINIF ILAKTFGSML FFVVIGLALT LQAYWPSSNP AAITGFVMVL LYMKGPLEQV VTILPIVSRA QVAFQRVAEL SERFSSPEPH LLLSEQEAPD KTVDSLELRD VRYSPPAVEG SEPFHLGPIN LRIAQGDIVF IVGENGCGKT TLIKLLLGLY RPQSGEILLN GEPVSAETRD DYRQLFSTIF ADYYLFDDLV QGKQASLQNA TQYLQRLEIA HKVSVMDGNF STTDLSTGQR KRLALINAWL EERPVLVFDE WAADQDPAFR RVFYTELLPD LKRQGKTIIV ISHDDRYFEM ADQLIRLSAG KVVKETETA
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