| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_33630 |
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| Symbol | pvdJ |
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| ID | 4380462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 2972068 |
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| End bp | 2978637 |
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| Gene Length | 6570 bp |
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| Protein Length | 2189 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639325273 |
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| Product | PvdJ |
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| Protein accession | YP_790842 |
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| Protein GI | 116050341 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.795242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.135203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCCA ATCCAAACCT GGACCTCGTG TCCCGCTTCG TTCGCCTGCC TCTGGCGCAG
CAGAAATTGT TCTATCAGCG TGTCCAGGCC AAGGGCATGA GCTTCGCCCG CCTGCCGATC
CCGCAGACTC GCCAGGAGAT GGACAACCTG CCGCTGTCCT ATGCCCAAGA GCGGCAGTGG
TTCCTCTGGC AGCTGGAGCC GGAGAGTTCC GCCTACCACA TTCCTACCGC CCTGCGCCTG
CGCGGTAGGT TGGACATTGC GTCCTTGCAG CGCAGCTTCG CGGCGCTCGT CGAGCGGCAC
GAAAGCCTGC GCACGCGGAT CGCGCGGATG GGTGATGAAT GGGTGCAGGT CGTCTCCGCC
GACGTCTCGC TGGCGCTCGA AGTCGAAGTG CAACGGGGAC TCGACGAACA GCGATTGCTG
GAGCGGGTCG AGGCGGAGAT CGCACGACCC TTCGATCTCG AACAGGGACC GTTACTGCGG
GTGACTTTGC TGGAGGTGGA CGCCGACGAG CATGTGCTGG TCATGGTCCA GCACCATATC
GTCTCCGACG GTTGGTCGAT GCAATTGATG GTCGAGGAAC TGGTCCAGCT CTATGCCGGC
TACAGCCAAG GGCTCGACGT GGTGTTGCCG GCCCTGCCGA TCCAGTACGC GGACTACGCC
CTGTGGCAGC GCAGCTGGAT GGAGGCGGGG GAAAAGGAGC GCCAGTTGGC GTACTGGACC
GGCCTGCTGG GCGGCGAGCA GCCGGTGCTG GAGTTGCCCC TCGATCACCC GCGGCAGCCG
CTGCGCAGCT ATCGTGGAGC GCAATTGGAC CTGGAGCTGG AGCCACACCT GGCCCTTGCC
TTGAAACAGC TGGTTCAGCG CAAGGGTGTG ACCATGTTCA TGCTGTTGCT GGCTTCCTTC
CAGGCGCTGT TGCATCGCTA TAGCGGACAG GCGGATATCC GTGTCGGCGT GCCGATCGCC
AACCGTAACC GGGTTGAAAC CGAGCGGATG ATCGGTTTCT TCGTCAACAC CCAGGTGCTC
AAGGCCGACA TCAATGGCCG GATGGGTTTC GACGAGTTGC TGGCCCAGGC CCGCCAGCGC
GCGCTGGAGG CACAGGCGCA CCAGGACCTG CCGTTCGAGC AACTGGTGGA GGCTTTGCAG
CCGGAACGCA GCCTCGGCCA CAACCCGTTG TTCCAGGTCA TGTTCAATCA CCAGGCCGAC
TCTCGTTCGG CCAACCAGGG CGTGCAACTG CCAGGCCTGT CGCTGGAGCG GATGGAGTGG
CGGAGCAGCT CCGTGGCCTT CGACCTGACG CTGGACGTGC ACGAGGCCGA GGACGGTATC
TGGGCATCGT TCGGCTATGC CACGGATCTG TTCGAGGCCT CGACCGTCGA GCGCCTGGCT
CGGCACTGGC AGAATCTCCT GCGCGGCATC GTGGCCGAAC CGGGCCGGCC GGTCGCCGAG
TTGCCGCTGT TGCTGGACGA GGAGCGCGAT TGCCTGTTGC GGGCCTGGGC AGAGAACGCC
GACGAGGGTG GGTTGCCGCC CCTGGTCCAG TTGCAGATCC AGGAGCAGGC CCGTCTGCGT
CCGCAGGCGC AAGCACTGGC GCTGGAGGGG CAGGCGTTGA GCTACGCCGA GCTCAACGCC
CGCGCCAATC GTCTGGCTCA CTGCCTGATA GCGCGTGGCG TCGGTCCCGA TGTGCTGGTG
GGAATCGCCG TCGAGCGCTC GCTGGACATG GTGGTCGGTC TGCTGGCGAT CCTCAAGGCC
GGTGGTGCCT ATGTGCCGCT GGACCCGACC TATCCGCAGG ACCGTTTGCG TCACATGCTC
GAGGACAGCG CCGTCGGCCT GTTGCTCAGC CAGGAGCATT TGCTGCCCGG GCTGCCTTTG
CACGAAGGGC TGGAGGTGCT CTCCATCGAC CGCCTGGAAC GGGACGCATC GGTGTCCACG
GATGATCCGG TGGTGAACCT GCGGCCGGAG AACCTGGCCT ATGTGATCTA CACCTCCGGC
TCCACCGGAA AACCCAAGGG CGTGGCCATC AGCCATGCGG CGCTTGCGCA GTTCTCGCGT
ATCGCCAGTG GTTATTCCGC GCTCACCCCG GAGGATCGGA TATTGCAGTT CGCCACCCTG
AGTTTCGACG GCTTCGTCGA ACAGCTCTAT CCGGCGCTGA CCCGTGGTGC CTGCGTGGTC
CTGCGTGGCG GCGACCTCTG GGATACCGGT GAGCTGTATC GGCAGATAGT CGAGCAGGGC
GTGACCCTTG CCGACCTGCC CACGGCGTAC TGGAACCTGT TCCTGCTCGA TGCCCTGGCC
GAGCCACGGC GTTCCTACGG TGCCTTGCGG CAGATCCACA TCGGTGGCGA AGCCATGCCA
CTGGAGGGGC CGAAGCTCTG GCGGCAAGCC GGCATGGGCC GGGTGAGGTT GCTCAATACC
TATGGACCGA CCGAGGCCAC GGTGGTGTCC AGCGTCTTCG ATTGTTCCGC CGAGAACGCC
CGGGTGGGCA ATGCCAGTCC TATCGGCCAG GCGCTACCCG GCCGTACGTT GCTGGTGCTG
GATGAACATC TCGGCCTACT GCCCGTAGGG GCGGTAGGCG AGCTTTATAT CGCCAGCCGT
GCCGGGCTGG CCCGTGCCTA CCACGATCGG CCCGGCTTGA CCGCCGAGCG CTTCTTGCCC
GACCCCTTCG GCGAACCGGG CTCGAGGCTC TACCGGACCG GCGACCTGGC GCGCCGACGC
GGTGACGGCG TGATCGAGTA CATGGGGCGT GCCGACCATC AGGTGAAGAT CCGCGGCTTC
CGCATCGAGC TGGGGGAGGT CGAAGCCCGC CTCCTGGACT TGGAGGGAAT ACGCGAAGCG
GCGGCTCTTG CGCTGGACGG TCAACTGGTG GCCTACCTGG TGGCTGAGGG GGGCGAGGAC
GAAACTCGCC AGCCGGCTTT GCGCGAGCGT ATCCGCACAG CGCTACGGGC CTCGCTACCG
GACTACATGG TGCCCTCGCA CCTGCTGTTC CTCGAGCGGA TGCCGCTCAG TCCAAATGGC
AAGCTGGACC GTCGGGCGCT GCCGAAGCCG GATGCCGGCC TGATGCAACG CGACCACATG
GCGCCGGCGA GCGCGCTGGA GAAAGATGTG GCCGCGATAT GGGGCGAGTT GCTGGGCGTC
GAACGGGTCG GCCTGACCGA CAACTTCTTC GAATTGGGCG GACACTCGCT GCTGGCGACG
CGCCTGGTCT CGCGGATTCG CCAGGATCTC GGTATCGAAG TCAGCCTGAA GAGCCTTTTC
GAGCAGCCGG TCCTGCAGGG ATTCGTCGAG AGCCTGGGCG AGAAACCGGC GGAGGTTCCG
CCGATCACGC CCGTTACCCG CGAGCAGCCG CTGCCGTTGT CCTATGCACA GGAGCGCCAG
TGGTTCCTCT GGCAATTGGA ACCGGAGAGC GCGGCCTATC ACATTCCCGC CGCCCTGCGC
TTGCGCGGCG GCCTCGATGT CGTCGCGCTA CAGCGCAGTT TCGAGCGCCT TGCACAGCGT
CACGAGTCGT TGCGTACCCG CTTCCGCCAG GAAGGCCTGC GTACCGTTCA GGTGGTGGAC
GCCGATGGGC AGTTGCAGGT TTCCCGGCAT AACCTGGCGA ATGTCGATGA CGCGTCGCTC
AGGGCGGCAG TCGAAGCGGA GATGGCCAGG CCCTTCGACC TACGGACGGA TGCGTTGCTG
CGGATCAGTC TGTTCGAAGT GGCTCCGAAT GACCATGTGC TGGTCATGGT CCAGCACCAT
ATCGTCTCCG ACGGTTGGTC GATGCAGTTG ATGGTCGAAG AGCTGGTCCA GCTCTATGCC
GCCTACAGCC AGGGGCGCGA AGCGGCCCTG CCGGCGCTGC CGATACAGTA TCCGGACTAT
GCCGTCTGGC AGCGCGAATG GATGGAGGCC GGAGAGAGGG AGCGCCAGTT GGCGTACTGG
ATCGGCCTGC TGGGTGGCGA ACAGCCGGTG CTGGAGCTGC CGTTCGATCG TCCCCGTCCT
GCGGAGCAGA GCTTTCGCGG CGCGCGGCTG GAGTTCGAAC TCGGCGCCGA GCGGGCCAGG
CGGCTGAAGG CGCTTGCCCA GCGGCAGGGT GCGAGTACCT TCATGTTGCT GCTGGCATCG
TTCCAGGCGC TGCTGTATCG CTACAGCGGT CAGTCGGATA TCCGTGTCGG CGTGCCGGTC
GCCAATCGCA ACCGGGTCGA AACCGAGCGA CTGATCGGGT TCTTCGTCAA CACCCAGGTG
CTCAAGGCCG ACATCGATGG GCAGATGGGG TTCGAGCGAT TGCTGCACCA GGTTCGCCAG
CGCTCGCTGG AGGCGCAGGC GCACCAGGAC TTGCCGTTCG AGCAACTGGT GGAAGCCTTG
CAACCGGAGC GCAGTCTCAG CCACAGCCCG CTGTTCCAGG TGCTATTCAA CTACCAGGCG
GAGCGGGGCG AGCACGGCTT GCCGGAAGTC GCGGGACTGA GCATCGAAGA GCAGGCGTGG
GAAAGCCATA CGGCGCAGTT CGACCTGGTG CTGGATACCT GTGAGTCCGA GTCGGACATC
TGGGCGGCGC TGGTCTATGC GACCGATCTA TTCGATGCTT CGACCGCAGA GCGCCTGGTA
CGGCATTGGC AGAATCTGCT GGATGCGATC CTGGCGATGC CTGACGCTCG CCTGGGAGAG
CTGGACATGC TCGACCGCGA GGAGCGCGAA GTCATCGGGC AGCTCTGGAA CCGCAGCGAC
TCGGGCTATC CGGCAACGCC GCTGGTACAC CAGCGAGTGG CCGAGCGGGC GCGTATGGCG
CCGGATGCGG TGGCGGTGAT CTTCGACGAG GAAAAGCTCA CCTACGCCGA GCTGGATAGC
CGGGCCAACC GCCTGGCCCA TGCGTTGATC GCCCTAGGCG TCGGCCCCGA GGTGCGGGTG
GCGATCGCCA TGCAGCGCAG CGCGGAGATC ATGGTGGCGT TCCTGGCGGT ACTGAAGGCC
GGCGGCGCCT ACGTGCCGCT GGATATCGAA TACCCGCGCG AGCGCCTGCT GTACATGATG
CAGGACAGTC GCGCGCACCT GCTGCTGACC CATAGCCACC TGCTGGAGCT TCTGCCGATC
CCCGAGGGGT TGTCCTGCCT GTCCGTGGAT CGCGAGGAGG AGTGGGCCGG CTTCCCCGCC
CATGATCCAG AGGTGGCGCT GCACGGCGAC AACCTGGCCT ATGTGATCTA CACCTCCGGC
TCCACCGGCA TGCCCAAGGG CGTGGCGGTG CCCCACGGTC CGCTGATCGC CCATATCGTG
GCTACCGGCG AGCGCTACGA GATGACCCCG GAGGACTGCG AGCTGCACTT CATGTCGTTC
GCCTTCGACG GTTCCCACGA AGGCTGGATG CACCCGTTGA TCAACGGCGC GCGGGTGCTG
ATCCGCGACG ACAGCCTGTG GCTGCCGGAA CGGACCTACG CCGAGATGCA TCGCCACGGG
GTAACGGTGG GGGTGTTCCC GCCGGTGTAC CTGCAGCAAC TGGCCGAGCA TGCCGCGCGC
GACGGCAATC CGCCGCCGGT ACGGGTCTAC TGCTTCGGCG GCGACGCGGT GGCGCAGGCC
AGCTATGACC TGGCGTGGCG GGCGCTGAAG CCGAAGTACC TGTTCAACGG CTACGGCCCG
ACCGAGACGG TGGTGACGCC GCTGCTGTGG AAAGCGCGAG CGGGCGATGC CTGCGGCGCG
GCCTACATGC CGATCGGTAC GCTGCTGGGC AACCGTAGCG GCTACATCCT CGACGGGCAG
TTGAACCTGC TGCCGGTAGG CGTGGCGGGC GAACTGTACC TGGGCGGGGA AGGGGTGGCG
CGCGGCTACC TGGAGCGTCC GGCGCTGACC GCCGAGCGTT TCGTGCCGGA TCCCTTTGGT
GCGCCGGGCA GCCGGCTGTA CCGCAGCGGC GACCTGACCC GTGGGCGTGC GGATGGGGTG
GTGGATTACC TCGGACGGGT GGATCACCAG GTGAAGATCC GAGGCTTCCG CATCGAACTG
GGAGAGATCG AGGCGCGCCT GCGCGAGCAT CCGGCGGTGC GCGAGGCGGT GGTGGTGGCC
CAGCCGGGCG CGGTGGGCCA GCAGTTGGTG GGCTACGTGG TGGCGCAGGA GCCGGCGGTC
GCGGATTCGC CGGAAGCGCA GGCGGAGTGC CGGGCGCAGT TGAAGACGGC GCTGCGCGAG
CGCCTGCCGG AATACATGGT GCCGTCGCAC CTGTTGTTCC TGGCGCGGAT GCCGCTGACG
CCGAACGGCA AGCTGGACCG CAAGGGCCTG CCACAGCCGG ATGCGAGCCT GTTGCAGCAG
GTCTACGTGG CGCCGCGAAG CGATCTGGAG CAACAGGTCG CGGGGATCTG GGCGGAGGTC
CTGCAATTGC AACAGGTCGG GCTCGACGAC AACTTCTTCG AACTCGGCGG CCACTCGTTG
CTGGCCACCC AGGTCATTGG CCGCCTACGC GAACGACTGC ACCTGGAGGT GCCGATCAAG
TCGATGTTCA CCGCGGAGAC ACTGGGTGAG TTCTGCCACG GCGTCGAGAC CCTCAAGGCC
GAGAGCGCGC CGGTGGAAGA TGCCCTGGCT AAATCCCTGG AGGCGCTCAA ACGTCTATCT
GCCGATGAAC TTGAAAAACT GATTTCCTAA
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| Protein sequence | MLSNPNLDLV SRFVRLPLAQ QKLFYQRVQA KGMSFARLPI PQTRQEMDNL PLSYAQERQW
FLWQLEPESS AYHIPTALRL RGRLDIASLQ RSFAALVERH ESLRTRIARM GDEWVQVVSA
DVSLALEVEV QRGLDEQRLL ERVEAEIARP FDLEQGPLLR VTLLEVDADE HVLVMVQHHI
VSDGWSMQLM VEELVQLYAG YSQGLDVVLP ALPIQYADYA LWQRSWMEAG EKERQLAYWT
GLLGGEQPVL ELPLDHPRQP LRSYRGAQLD LELEPHLALA LKQLVQRKGV TMFMLLLASF
QALLHRYSGQ ADIRVGVPIA NRNRVETERM IGFFVNTQVL KADINGRMGF DELLAQARQR
ALEAQAHQDL PFEQLVEALQ PERSLGHNPL FQVMFNHQAD SRSANQGVQL PGLSLERMEW
RSSSVAFDLT LDVHEAEDGI WASFGYATDL FEASTVERLA RHWQNLLRGI VAEPGRPVAE
LPLLLDEERD CLLRAWAENA DEGGLPPLVQ LQIQEQARLR PQAQALALEG QALSYAELNA
RANRLAHCLI ARGVGPDVLV GIAVERSLDM VVGLLAILKA GGAYVPLDPT YPQDRLRHML
EDSAVGLLLS QEHLLPGLPL HEGLEVLSID RLERDASVST DDPVVNLRPE NLAYVIYTSG
STGKPKGVAI SHAALAQFSR IASGYSALTP EDRILQFATL SFDGFVEQLY PALTRGACVV
LRGGDLWDTG ELYRQIVEQG VTLADLPTAY WNLFLLDALA EPRRSYGALR QIHIGGEAMP
LEGPKLWRQA GMGRVRLLNT YGPTEATVVS SVFDCSAENA RVGNASPIGQ ALPGRTLLVL
DEHLGLLPVG AVGELYIASR AGLARAYHDR PGLTAERFLP DPFGEPGSRL YRTGDLARRR
GDGVIEYMGR ADHQVKIRGF RIELGEVEAR LLDLEGIREA AALALDGQLV AYLVAEGGED
ETRQPALRER IRTALRASLP DYMVPSHLLF LERMPLSPNG KLDRRALPKP DAGLMQRDHM
APASALEKDV AAIWGELLGV ERVGLTDNFF ELGGHSLLAT RLVSRIRQDL GIEVSLKSLF
EQPVLQGFVE SLGEKPAEVP PITPVTREQP LPLSYAQERQ WFLWQLEPES AAYHIPAALR
LRGGLDVVAL QRSFERLAQR HESLRTRFRQ EGLRTVQVVD ADGQLQVSRH NLANVDDASL
RAAVEAEMAR PFDLRTDALL RISLFEVAPN DHVLVMVQHH IVSDGWSMQL MVEELVQLYA
AYSQGREAAL PALPIQYPDY AVWQREWMEA GERERQLAYW IGLLGGEQPV LELPFDRPRP
AEQSFRGARL EFELGAERAR RLKALAQRQG ASTFMLLLAS FQALLYRYSG QSDIRVGVPV
ANRNRVETER LIGFFVNTQV LKADIDGQMG FERLLHQVRQ RSLEAQAHQD LPFEQLVEAL
QPERSLSHSP LFQVLFNYQA ERGEHGLPEV AGLSIEEQAW ESHTAQFDLV LDTCESESDI
WAALVYATDL FDASTAERLV RHWQNLLDAI LAMPDARLGE LDMLDREERE VIGQLWNRSD
SGYPATPLVH QRVAERARMA PDAVAVIFDE EKLTYAELDS RANRLAHALI ALGVGPEVRV
AIAMQRSAEI MVAFLAVLKA GGAYVPLDIE YPRERLLYMM QDSRAHLLLT HSHLLELLPI
PEGLSCLSVD REEEWAGFPA HDPEVALHGD NLAYVIYTSG STGMPKGVAV PHGPLIAHIV
ATGERYEMTP EDCELHFMSF AFDGSHEGWM HPLINGARVL IRDDSLWLPE RTYAEMHRHG
VTVGVFPPVY LQQLAEHAAR DGNPPPVRVY CFGGDAVAQA SYDLAWRALK PKYLFNGYGP
TETVVTPLLW KARAGDACGA AYMPIGTLLG NRSGYILDGQ LNLLPVGVAG ELYLGGEGVA
RGYLERPALT AERFVPDPFG APGSRLYRSG DLTRGRADGV VDYLGRVDHQ VKIRGFRIEL
GEIEARLREH PAVREAVVVA QPGAVGQQLV GYVVAQEPAV ADSPEAQAEC RAQLKTALRE
RLPEYMVPSH LLFLARMPLT PNGKLDRKGL PQPDASLLQQ VYVAPRSDLE QQVAGIWAEV
LQLQQVGLDD NFFELGGHSL LATQVIGRLR ERLHLEVPIK SMFTAETLGE FCHGVETLKA
ESAPVEDALA KSLEALKRLS ADELEKLIS
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