Gene PA14_33600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_33600 
Symbol 
ID4380464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2955085 
End bp2956296 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content64% 
IMG OID639325271 
Producthypothetical protein 
Protein accessionYP_790840 
Protein GI116050343 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000203719 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0451253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAA AGTCCCGCTC CAGACTCTGG TTCCTCGTCC ACAGCTGGCT GGCCCTGCCC 
ATCTGGTTCT TCGTCCTGAT CGTCTGCGTC ACCGGCACCC TGGCGGTGGT CAGCCAGGAG
ATCGTCTGGC TGGCCAACCC TGACGTCCGG GCCAGCAAGC CCTACGAAGA TGCCGAGCCG
CTCAGCTTCA GCCAGGTCCT GAAGGCGATC AACGAAGCCC AACCGGACCT CCTGGTCGAA
TCCATCCAGC GCCCCGACGA AGAGCATTTC GCCCTTACTG CCGAGGTCAG CTATCCCGGC
GGCAGCGAGG CGACCCTGTA CATCAACCCC TACACCGGCG CCATCCAGGG CGAAAGCCCC
TCCTTCGACT TTCGTCAGTT CACCCGTGCC CTGCACGGAT GGTGGCTGGT TCCGTTCAAC
AACGGCTACA GCTGGGGCTG GTACATGGTC TCGCTGCTCG GCCTCCCCAT GCTGGCATCG
CTCATCACCG GGCTGGTGGT CTATAAACGA TTCTGGAAGG GCTTTCTCAA ACCCAGATTA
CGCATCAACC AGGGCGCCCG GATCTTCTGG GGCGACTTCC ATCGCCTGAG CGGCATCTGG
TCGATCTGGT TCATCGCCCT GATTTCCATC ACCGGCACCT GGTTCCTGAT CCAGGCCATC
CTTGCCGACA ACCACGTCAC CCTGACCAAC GACGGCATCC CTCCGGTCAT CGCACGCGCC
GACGTGCCCC GCGCCGCACC CGGTCAGAAG GTTCCATACA TCGAGCTGGA CGAGGCGGTG
CGGCTCGTCA CCGGGCGTAT CCCCAGCCTG GAGGCCAGCG CGGTGTTCTT GCCCGGCAAC
GCCTACAGCC CGATGTTCGT GGCTGGACGC GGCTGGTATC CGCTCATGTT CCAGTCGGCC
GCGCTGAACC CTTATACCGG CAAGATCGAA ACCACCCGCT TGCTCAGCGA CCGTACCCCC
CTGCAGTTCG TCACCGAATC CATGCGTCCC CTGCACACCG GCGATTTCGG CGGTATCTGG
GTCAAGCTGA TCTGGTTCGT CTTCGGCCTG CTGCTGAGCA TGATGGTGCT CAGCGGCCTG
CTGATCTGGA GCAAGCGCAC CGCACAGGCC ACCGCCGCGC TGGTCAAGCG CGGCAAGCGC
CCGGCGCGCC AGCCGAAACC GGCCAAGCCG GCGCCGGTAA TGGCCAACCA GACCGCGGAG
GGACAGCCAT GA
 
Protein sequence
MSKKSRSRLW FLVHSWLALP IWFFVLIVCV TGTLAVVSQE IVWLANPDVR ASKPYEDAEP 
LSFSQVLKAI NEAQPDLLVE SIQRPDEEHF ALTAEVSYPG GSEATLYINP YTGAIQGESP
SFDFRQFTRA LHGWWLVPFN NGYSWGWYMV SLLGLPMLAS LITGLVVYKR FWKGFLKPRL
RINQGARIFW GDFHRLSGIW SIWFIALISI TGTWFLIQAI LADNHVTLTN DGIPPVIARA
DVPRAAPGQK VPYIELDEAV RLVTGRIPSL EASAVFLPGN AYSPMFVAGR GWYPLMFQSA
ALNPYTGKIE TTRLLSDRTP LQFVTESMRP LHTGDFGGIW VKLIWFVFGL LLSMMVLSGL
LIWSKRTAQA TAALVKRGKR PARQPKPAKP APVMANQTAE GQP