Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_33010 |
Symbol | glyA2 |
ID | 4380532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2889137 |
End bp | 2890393 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639325222 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_790791 |
Protein GI | 116050392 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.821039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.000096337 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCAGCA AGCACGACCA GCTCCAGGGC TACGACGACG AACTGCTCGC CGCGATGGAC GCCGAAGACC GGCGGCAGGA AGACCACATC GAACTGATCG CCTCGGAGAA CTACGCCAGC AAGCGGGTCA TGCAGGCGCA GGGCAGCGGC CTGACCAACA AGTATGCCGA GGGCTATCCG GGCAAGCGCT ACTACGGCGG CTGCGAACAC GTCGACAAGG TCGAGCGGCT GGCCATCGAC CGCGCCAGGC AGCTGTTCGG CGCCGACTAC GCCAACGTCC AGCCGCATTC CGGTTCCTCG GCCAACGCCG CGGTGTACCT GGCGCTGCTC AACGCCGGCG ACACCATCCT CGGCATGAGC CTGGCCCATG GCGGCCATCT CACCCATGGC GCCAAGGTGT CGTCCTCCGG CAAGCTGTAC AACGCCGTGC AGTACGGCCT GGACACCGCT ACCGGGCTGA TCGACTACGA CGAAGTCGAG CGCCTGGCCG TGGAGCATAA GCCGAAGATG ATCGTCGCCG GCTTCTCCGC CTACTCCAAG ACCCTCGACT TCCCGCGCTT CCGCGCCATC GCCGACAAGG TCGGCGCGCT GCTGTTCGTC GACATGGCCC ACGTTGCCGG GCTGGTCGCC GCCGGCCTCT ACCCGAACCC GATCCCCTTC GCCGACGTGG TCACCACCAC CACCCACAAG ACCCTGCGCG GTCCGCGCGG CGGTCTGATC CTGGCGCGCG CCAACGAGGA GATCGAGAAG AAGCTCAACT CCGCGGTATT CCCCGGCGCC CAGGGCGGCC CGCTGATGCA CGTGATCGCG GCCAAGGCGG TGTGCTTCAA GGAAGCGCTG GAGCCGGGCT TCAAGGACTA CCAGGCGCAG GTGATCCGCA ACGCCAAGGC GATGGCCGAG GTGTTTATCG GGCGCGGCTA CGACGTGGTT TCCGGTGGCA CCGACAACCA CCTGATGCTG ATCAGCCTGG TGAAGCAGGG GCTGACCGGC AAGGCCGCCG ACGCGGCGCT CGGAGCGGCG CACATCACGG TGAACAAGAA CGCCGTGCCG AACGATCCAC AGAGCCCGTT CGTCACCTCC GGCATCCGCA TCGGCACCCC AGCGGTGACC ACTCGCGGTT TCCGCGAGGG CGAGTGCCGC GAACTGGCTG GCTGGATCTG CGACATCCTC GACGATATCG ACAATCCCGA GGTCGGCGAA CGGGTCAGGG GCCAGGTCGG CGAATTCTGC CGGCACTTCC CGGTCTACGC TGATTGA
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Protein sequence | MFSKHDQLQG YDDELLAAMD AEDRRQEDHI ELIASENYAS KRVMQAQGSG LTNKYAEGYP GKRYYGGCEH VDKVERLAID RARQLFGADY ANVQPHSGSS ANAAVYLALL NAGDTILGMS LAHGGHLTHG AKVSSSGKLY NAVQYGLDTA TGLIDYDEVE RLAVEHKPKM IVAGFSAYSK TLDFPRFRAI ADKVGALLFV DMAHVAGLVA AGLYPNPIPF ADVVTTTTHK TLRGPRGGLI LARANEEIEK KLNSAVFPGA QGGPLMHVIA AKAVCFKEAL EPGFKDYQAQ VIRNAKAMAE VFIGRGYDVV SGGTDNHLML ISLVKQGLTG KAADAALGAA HITVNKNAVP NDPQSPFVTS GIRIGTPAVT TRGFREGECR ELAGWICDIL DDIDNPEVGE RVRGQVGEFC RHFPVYAD
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