| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_33000 |
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| Symbol | gcvP2 |
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| ID | 4380533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 2886115 |
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| End bp | 2888994 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639325221 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_790790 |
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| Protein GI | 116050393 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00002452 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGATA ACCTGAACCT CGGCACCATC GACCTGGGCA CCGACGACGA ATTCATCGCC
CGCCATATCG GCCCGCGCGC CGCCGACACC CAGGCCATGC TCCAGCGCCT GGGCTACGAC
TCGCTGGACA CGCTGATCGG CAACGTGATC CCGGACAGCA TCAAGGGCAG CAGCGTGCTC
GACCTGCCGG CCGGCATGGG CGAGGCCGAG GCGCTGGCCA GCCTGAAGGC GATCGCCGCG
CGCAATCGCG CGTTGCGTTC CTTCATCGGC CAGGGCTACT ACAACTGCCA CACCCCGGCA
CCGATCCTGC GCAACCTCCT GGAGAACCCG GCCTGGTACA CCGCCTACAC GCCGTACCAG
CCGGAAATCT CCCAGGGCCG CCTGGAGGCG CTGCTGAACT TCCAGACCCT GGTCAGCGAC
CTGTCCGGCC TGCCGATCGC CAACGCCTCG ATGCTCGACG AGGCGACCGC CGCCGCCGAG
GCCATGACCT TCTGCAAGCG CCTGTCGAAG AACCGCACCA GCCAGGCATT CTTCGCCTCC
CGCCATTGCC ACCCGCAGAC CCTCGACGTG CTGCGCACCC GTGCTGAGCC GCTGGGCATC
GAGGTGGTGG TCGGCGACGA GAGCGCCATC GAAGACTTCT CCGCCTACTT CGGCGCGTTG
CTGCAATACC CCACCTGCGA CGGCGAGATC GTCGACTATC GCGAACTGGT CAGCCGCTTC
CATGCGGTCG ATGCGCTGGT CGCGGTGGCC GCCGACCTGC TGGCGCTGAC CCTGCTGACC
CCGCCGGGCG AGTTCGGCGC CGACGTGGCC ATCGGCAGCG CCCAGCGCTT CGGCGTGCCG
CTCGGCTTCG GCGGCCCGCA CGCGGCCTAT TTCGCCACCC GCGACGCCTT CAAGCGGGAC
ATGCCGGGAC GCCTGGTCGG CGTCTCCATC GACCGCCACG GCAAGCCGGC CTACCGCCTG
GCCATGCAGA CCCGCGAGCA GCACATCCGC CGCGAGAAAG CCACCAGCAA CATCTGCACC
GCCCAGGTGC TGCTGGCCAA CATCGCCAGC ATGTTCGCCG TCTACCACGG CCCGCAGGGC
CTGCTGCGCA TCGCCCGGCG CACCCACCGG CTGACCGCGA TCCTCGCCGC CGGCCTGGAG
CGCCTGGGCG TGGCCGTCGA GCAGAAGCAT TTCTTCGACA CCCTGAGCCT GGCCACCGGC
GCGCGTACCG CGGCGATCCA TGCCAAGGCC CGCGCCGCCG GGATCAACCT GCGCGAGATC
GATGCCGGCC GTCTCGGCCT GTCGCTCGAC GAGACCGTCC GCCAGGCCGA TGTGGAGACC
CTCTGGGGCC TGCTGGCCGA AGAGGGCCAG GCGCTCCCGG ACTTCGCCGC CCTTGCCGCC
AGCAGCGGGG ACCGCCTGCC GGTCGAGCTG CTGCGCCAGT CGGCGATCCT CAGCCACCCG
ATCTTCAACC GCCATCACTC GGAAACCGAG CTGATGCGCT ACCTGCGCAA GCTGGCGGAC
AAGGACCTGG CGCTGGACCG CACGATGATC CCGCTGGGCT CCTGCACCAT GAAGCTGAAC
GCCGCCAGCG AGATGATCCC GGTGACCTGG GCCGAATTCG GCAACCTGCA CCCGTTCGCC
CCGGCCGAGC AGAGCGAAGG CTACCGCCAG CTCACCGACG AACTGGAGGC GATGCTCTGT
TCCGCCACCG GCTACGACGC CGTGTCGTTG CAGCCCAACG CCGGCTCCCA GGGCGAGTAC
GCCGGCCTGC TGGCGATCCG TGCCTACCAC CAGAGCCGCG GCGACAGCCA GCGCGACATC
TGTCTGATCC CGTCCTCCGC CCACGGTACC AACCCGGCTA CCGCCAGCAT GGTCGGCATG
CGCGTGGTGG TGGTGGCCTG CGACGCGCGC GGCAACGTCG ACGTCGAGGA CCTGCGCAAC
AAGGCCAGCG AGCACAAGGA ACGCCTGGCC GCGCTGATGA TCACCTATCC GTCCACCCAT
GGCGTGTTCG AGGAAGCGAT CCGCGAGATC TGCGCCATCG TCCACGACTG CGGCGGCCAG
GTGTACATCG ACGGCGCCAA CATGAACGCC ATGGTCGGCC TGTGCGCCCC GGGCAAGTTC
GGTGGCGACG TTTCCCACCT GAACCTGCAC AAGACCTTCT GCATCCCCCA CGGCGGCGGC
GGCCCGGGCG TCGGCCCGAT CGGCGTGCGC GCGCACCTGG CGCCGTTCCT CCCCGGCCAC
GCTCGCGGCG AGCGCAAGGA AGGCGCGGTG AGCGCGGCGC CGTACGGCAG CGCGAGCATC
CTGCCGATCA CCTGGATGTA CATCCGCATG ATGGGCGGCG AAGGCCTCAA GCGCGCCTCG
GAAATGGCCA TCCTCAATGC CAACTACATC GCCCACCGGC TGGAGGAGCA CTACCCGGTG
CTCTACGCCG GCGGCAACGG CCTGGTCGCC CACGAATGCA TCCTCGACCT GCGTCCGCTC
AAGGACAGCA GCGGGATCAG CGTCGACGAC GTGGCCAAGC GCCTGATGGA CTTCGGCTTC
CATGCGCCGA CCATGTCCTT CCCGGTGGCC GGCACGCTGA TGATCGAGCC CACCGAGAGC
GAGTCGAAGG CCGAGCTGGA CCGCTTCTGC GACGCGATGA TCCGCATCCG CGAGGAAATC
CGCGCGGTGG AACGCGGCGA GCTGGACAAG GAAGACAACC CGCTGAAGAA CGCGCCGCAC
ACCGCCGCCG AACTGCTCGG CGAATGGAAC CATGCCTACA GCCGCGAGCA GGCCGCCTAT
CCGCTGGCCA GCCTGGTGGA GGCCAAGTAC TGGCCGCCGG TGGGCCGCGT CGACAACGTC
TACGGCGACC GCAACCTGAC CTGCTCCTGC CCGCCGATCG AGGCGTACAG CGAGGAGTGA
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| Protein sequence | MTDNLNLGTI DLGTDDEFIA RHIGPRAADT QAMLQRLGYD SLDTLIGNVI PDSIKGSSVL
DLPAGMGEAE ALASLKAIAA RNRALRSFIG QGYYNCHTPA PILRNLLENP AWYTAYTPYQ
PEISQGRLEA LLNFQTLVSD LSGLPIANAS MLDEATAAAE AMTFCKRLSK NRTSQAFFAS
RHCHPQTLDV LRTRAEPLGI EVVVGDESAI EDFSAYFGAL LQYPTCDGEI VDYRELVSRF
HAVDALVAVA ADLLALTLLT PPGEFGADVA IGSAQRFGVP LGFGGPHAAY FATRDAFKRD
MPGRLVGVSI DRHGKPAYRL AMQTREQHIR REKATSNICT AQVLLANIAS MFAVYHGPQG
LLRIARRTHR LTAILAAGLE RLGVAVEQKH FFDTLSLATG ARTAAIHAKA RAAGINLREI
DAGRLGLSLD ETVRQADVET LWGLLAEEGQ ALPDFAALAA SSGDRLPVEL LRQSAILSHP
IFNRHHSETE LMRYLRKLAD KDLALDRTMI PLGSCTMKLN AASEMIPVTW AEFGNLHPFA
PAEQSEGYRQ LTDELEAMLC SATGYDAVSL QPNAGSQGEY AGLLAIRAYH QSRGDSQRDI
CLIPSSAHGT NPATASMVGM RVVVVACDAR GNVDVEDLRN KASEHKERLA ALMITYPSTH
GVFEEAIREI CAIVHDCGGQ VYIDGANMNA MVGLCAPGKF GGDVSHLNLH KTFCIPHGGG
GPGVGPIGVR AHLAPFLPGH ARGERKEGAV SAAPYGSASI LPITWMYIRM MGGEGLKRAS
EMAILNANYI AHRLEEHYPV LYAGGNGLVA HECILDLRPL KDSSGISVDD VAKRLMDFGF
HAPTMSFPVA GTLMIEPTES ESKAELDRFC DAMIRIREEI RAVERGELDK EDNPLKNAPH
TAAELLGEWN HAYSREQAAY PLASLVEAKY WPPVGRVDNV YGDRNLTCSC PPIEAYSEE
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