Gene PA14_31960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_31960 
Symbol 
ID4383019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2782854 
End bp2783528 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content65% 
IMG OID639325146 
Productputative two-component response regulator 
Protein accessionYP_790715 
Protein GI116050466 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR01387] heavy metal response regulator 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.029957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCC TTATTATCGA AGATGAAGTC AAGACTGCCG ACTACCTGCA CCAGGGCCTG 
ACCGAAAGCG GCTACATCGT CGACCGCGCC AACGATGGCA TCGACGGCCT GCACATGGCC
TTGCAACACC CTTACGAACT GGTGATCCTC GACGTCAACC TGCCCGGCAT CGACGGCTGG
GACCTGCTCC GCCGCCTGCG CGAACGCAGC AGCGCGCGGG TGATGATGCT CACCGGGCAT
GGCAGGCTGA CCGACAAGGT GCGCGGCCTC GATCTCGGCG CCGACGACTT CATGGTCAAG
CCGTTCCAGT TCCCCGAACT GCTGGCGCGG GTCCGCTCGC TGCTGCGCCG CCACGACCAG
GCACCGATGC AGGACGTCCT GCGGGTCGCC GACCTGGAGC TGGACGCCAG CCGCCACCGG
GCCTTCCGCG GCCGGGTGCG GATCAACCTG ACGACCAAGG AGTTCGCCCT GCTGCACCTG
CTGATGCGGC GCAACGGCGA CGTCATCACC CGGACGCAGA TCATCTCGCT GATCTGGGAC
ATGAACTTCG ACAACGACTC CAACGTGGTG GAGGTCGCCA TCTGCCGCCT GCGGGCGAAG
ATCGACGACG GCTTCGACCT CAAGCTGATC CATACCATTC GCGGCGTCGG CTACGTCCTG
GAAGCGCGCC GATGA
 
Protein sequence
MRILIIEDEV KTADYLHQGL TESGYIVDRA NDGIDGLHMA LQHPYELVIL DVNLPGIDGW 
DLLRRLRERS SARVMMLTGH GRLTDKVRGL DLGADDFMVK PFQFPELLAR VRSLLRRHDQ
APMQDVLRVA DLELDASRHR AFRGRVRINL TTKEFALLHL LMRRNGDVIT RTQIISLIWD
MNFDNDSNVV EVAICRLRAK IDDGFDLKLI HTIRGVGYVL EARR