Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_31960 |
Symbol | |
ID | 4383019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2782854 |
End bp | 2783528 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639325146 |
Product | putative two-component response regulator |
Protein accession | YP_790715 |
Protein GI | 116050466 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.029957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATCC TTATTATCGA AGATGAAGTC AAGACTGCCG ACTACCTGCA CCAGGGCCTG ACCGAAAGCG GCTACATCGT CGACCGCGCC AACGATGGCA TCGACGGCCT GCACATGGCC TTGCAACACC CTTACGAACT GGTGATCCTC GACGTCAACC TGCCCGGCAT CGACGGCTGG GACCTGCTCC GCCGCCTGCG CGAACGCAGC AGCGCGCGGG TGATGATGCT CACCGGGCAT GGCAGGCTGA CCGACAAGGT GCGCGGCCTC GATCTCGGCG CCGACGACTT CATGGTCAAG CCGTTCCAGT TCCCCGAACT GCTGGCGCGG GTCCGCTCGC TGCTGCGCCG CCACGACCAG GCACCGATGC AGGACGTCCT GCGGGTCGCC GACCTGGAGC TGGACGCCAG CCGCCACCGG GCCTTCCGCG GCCGGGTGCG GATCAACCTG ACGACCAAGG AGTTCGCCCT GCTGCACCTG CTGATGCGGC GCAACGGCGA CGTCATCACC CGGACGCAGA TCATCTCGCT GATCTGGGAC ATGAACTTCG ACAACGACTC CAACGTGGTG GAGGTCGCCA TCTGCCGCCT GCGGGCGAAG ATCGACGACG GCTTCGACCT CAAGCTGATC CATACCATTC GCGGCGTCGG CTACGTCCTG GAAGCGCGCC GATGA
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Protein sequence | MRILIIEDEV KTADYLHQGL TESGYIVDRA NDGIDGLHMA LQHPYELVIL DVNLPGIDGW DLLRRLRERS SARVMMLTGH GRLTDKVRGL DLGADDFMVK PFQFPELLAR VRSLLRRHDQ APMQDVLRVA DLELDASRHR AFRGRVRINL TTKEFALLHL LMRRNGDVIT RTQIISLIWD MNFDNDSNVV EVAICRLRAK IDDGFDLKLI HTIRGVGYVL EARR
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