Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_31540 |
Symbol | |
ID | 4381456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2742057 |
End bp | 2743184 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639325116 |
Product | putative acyl-CoA dehydrogenase |
Protein accession | YP_790685 |
Protein GI | 116050496 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.430124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.000095284 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTCCCT GCGAAGAAGA GATCCAGATC CGTGACATGG CGCGGCAGTT CGCCCAGGAA CGGCTGAAAC CGTTCGCCGC CGACTGGGAC CGCGAGCACC GTTTCCCGGC CGAGGCGATC CGCGAGATGG CCGACCTCGG CTTCCTCGGC ATGCTGGTGC CCGAGGAATG GGGCGGCGCG CAGACCGGGC ACCTGGCCTA CGCCATGGCC CTCGAGGAGA TCGCCGCTGG CGACGGCGCC TGCTCGACCA TCATGAGCGT GCACAACTCG GTCGGCTGCA TGCCGATCCA CAAGTTCGGC AGCGCCGAGC AGAAGGAGCG CTTCCTCCGT CCGCTGGCCC AGGGTTCGAT GCTCGGCGCC TTCGCCCTGA CCGAGCCGCA GGCCGGTTCC GACGCCAGCT TCCTGAAGAC CCGCGCCCGC CGCGACGGTG ACCACTACGT GCTGAACGGT GCCAAGCAGT TCATCACTTC GGGCAGCCAC GCGGGGATGG TGATCGTCTT CGCGGTCACC GATCCGGATG CCGGAAAGCG CGGCATCAGC GCGTTCATCG TGCCCACCGA CACGCCCGGC TACGAGGTGG TGCGGATCGA GGACAAGCTC GGCCAGCACG CCTCGGACAC CTGCCAGCTG GCCTTCAACG ACCTGCGTAT CCCGGCCACG CTGCGCCTGG GCGAGGAGGG CGAGGGCTAC CGCATTGCCC TGGCCAACCT CGAAGGCGGC CGCATCGGCA TCGCCGCCCA GGCGGTCGGC ATGGCGCGCG CGGCGTTCGA GGCGGCGCGC GACTACGCCC ACGAGCGGGA AACCTTCGGC AAGCCGATCA TCGAGCACCA GGCAGTGGCC TTCCGCCTGG CCGACATGGC TACCCGCATC GCCGTGGCGC GGCAGATGGT CCACCACGCC GCCAGCCTGC GCGAAGCCGG CCTGCCGTGT CTGACCGAAG CCTCGATGGC CAAGCTGTTC GCCTCGGAAA TGGCCGAGGA AGTCTGCTCC GCGGCGATCC AGACCCTCGG TGGCTACGGC TATCTCAAGG ACTTCCCGGT GGAGCGCATC TATCGGGACG TGCGGGTCTG CCAGATCTAC GAGGGCACCA GCGACGTGCA GCGCCTGGTG ATCGTGCGCA GCCTGTAG
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Protein sequence | MIPCEEEIQI RDMARQFAQE RLKPFAADWD REHRFPAEAI REMADLGFLG MLVPEEWGGA QTGHLAYAMA LEEIAAGDGA CSTIMSVHNS VGCMPIHKFG SAEQKERFLR PLAQGSMLGA FALTEPQAGS DASFLKTRAR RDGDHYVLNG AKQFITSGSH AGMVIVFAVT DPDAGKRGIS AFIVPTDTPG YEVVRIEDKL GQHASDTCQL AFNDLRIPAT LRLGEEGEGY RIALANLEGG RIGIAAQAVG MARAAFEAAR DYAHERETFG KPIIEHQAVA FRLADMATRI AVARQMVHHA ASLREAGLPC LTEASMAKLF ASEMAEEVCS AAIQTLGGYG YLKDFPVERI YRDVRVCQIY EGTSDVQRLV IVRSL
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