| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_31080 |
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| Symbol | |
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| ID | 4385852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 2703604 |
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| End bp | 2704179 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639325077 |
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| Product | putative conjugal transfer protein |
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| Protein accession | YP_790646 |
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| Protein GI | 116050535 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000000000439083 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 1.40338e-22 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGACCGCCG TTTCCACTGG CGCCAACACC ACTGGAAAGG CGCCGCGTCC TCGCTCGCGC
CAGCGCGCTC GCATCGTGCT CGCGGGCTTC GCCGCCTGCG GCCTTGCTGC GCTGGCCTGG
GCGTCCTTCG TGCATCCGAT GCCGCGCCTG ATCTACAACC CGTCCGACAG CGTTCCGGTG
GGCTGGTATC GCATCGCGCC ACCCGATGCG CCGCGCGTCG GCTCCATCGT GCTGACCACG
CTGCCGCCAG ACGCCGCCGC GCTGGCCGCG CAGCGCGGCT ACCTGCCGGC GCGCGTGCCG
CTGCTCAAGC GCGTGGGCGC GGTCGCGCCG CAGGAGGTGT GCGTTGCCAG CGGCATCGTC
CGCATCGACG GCGTGCCTTC GGCCGCCGCG CTGCCCGCCG ACCGTTGGGG CCGCCCGCTG
CCATCCTGGC AGCAGTGCCG CCGCCTTGAA CCCGGCGAGC TTTTCCTGTT GAGCGTGACC
AACCCGTCGT CGTTCGACAG CCGGTATTTC GGCCCGGTTG CCGCATCCGC CGTGATCGGC
GTCGCGCACC CGATCCGGCT GGAGGCCCGC CCATGA
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| Protein sequence | MTAVSTGANT TGKAPRPRSR QRARIVLAGF AACGLAALAW ASFVHPMPRL IYNPSDSVPV
GWYRIAPPDA PRVGSIVLTT LPPDAAALAA QRGYLPARVP LLKRVGAVAP QEVCVASGIV
RIDGVPSAAA LPADRWGRPL PSWQQCRRLE PGELFLLSVT NPSSFDSRYF GPVAASAVIG
VAHPIRLEAR P
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