| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_30880 |
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| Symbol | |
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| ID | 4385909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 2681412 |
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| End bp | 2682782 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639325059 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_790628 |
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| Protein GI | 116050553 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000015108 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 5.46381e-22 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAATGACG TGACGATCAT CGACCAGTTC CTCAACACCT TCGCCACCTA CATCGACTCG
GGTTTCGGGC TGCTGCGCGG CGAAGTGGCG TTCCTCACGG CCACGCTGAT CGTCATCGAC
ATGACGATCG CCGGGTTGTA TTGGGCCATG AGCCATGCCA CCGGCCAGGG CGAGGACGTG
ATCGCCAAGC TGCTGCGCAA GGTGCTGTAC GTCGGTGCCT TCGCCTACAT CATCAACAAC
TTCAACTGGC TGGCCAGCAT CGTGTTCCGC TCGTTCGCGG GACTGGGTAT CACCGCCACC
GGCTCGACTA TCACGATGGA AGACTTCTTG CAGCCGGGCC GGCTGGCGAA GGCCGGCCTT
GATGCGGGCG GGCCGATCTT CCTGCAACTC GATGACCTGA TGGGATTTCC CGAGGTGTTC
TTGAACCTCG ATGCCATCTT GGTGCTGTTC CTCGCATGGC TAGTCGTGGT GCTGTGCTTC
TTCGTGCTGG CGATCCAGCT TTTCATCACG CTGATCGAGT TCAAGTTGAC GACGCTGGCT
GGCTTCGTGC TGGTGCCGTT CGCGCTGTGG AACAAGACCT CGTTCCTGGC CGAAAAGGTG
CTGGGCAACG TGGTATCCGC TGGCGTCAAG GTGCTGGTTC TGGCTGTGAT CGTCGGTATC
GGCTCGGGCC TTTTCGCGCA GTTCCAAGTC CATCCTGACG AGCCTTCTAT CGACCACGCG
CTGGTCATCA TGCTGGCCTC GCTCACCTTG CTGGCGCTCG GGATCTTCGG CCCCGGCATC
GCCACGGGCC TCGTGTCCGG TGCGCCCCAG CTCGGCGCGG GCGCGATGGC CGGTGCCGCT
ATCGGCGCAG CCGGAACGGC AGTGGCTGTC GGTGCTGCCG CGACGGGCGT GGGCGGTGCG
GTGGCCGCTG GTGCCCGCAT GGCCCCGGCC GCCGCCAAGC TGGCCGGCAG CGGCGCGCGT
GCCGCCACGT CGGCGGCTGG CAGCGCGAAG TCGGCGTTCC AGGCCGGTTC CGCAGCAGCA
GGCGGCGGTG CCAAAGGCGC GATGGCGGGC TTGGGCAACG TCGCCAAGAC CGGCGCGCAG
TCCGCCGGAC GCGCTGCCGC ATCCCGCGCT TCCGCTGCTG GGCAGCGCAT GGCCGCGCCG
TTCCGCGCTG GCTGGAAAGG CGACGCTGGC GCGTCAGCCG GCCAAGCCGC CACCAGCGAA
GCCCCCGCAG GCGCTGCCGC TGCACAGACG CCCGAGCAAC CCGCCTGGGC CAAGCGGCTG
CAACGCCGCC AGCAACTCAC TCATGCCGCG ACCACCACCG CCCACACGCT GCGCGGTGGC
GATGGCGGCG GCTCCGGCCA AGGGCCGAGC CTGCGCGATT CCGACTCATA A
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| Protein sequence | MNDVTIIDQF LNTFATYIDS GFGLLRGEVA FLTATLIVID MTIAGLYWAM SHATGQGEDV
IAKLLRKVLY VGAFAYIINN FNWLASIVFR SFAGLGITAT GSTITMEDFL QPGRLAKAGL
DAGGPIFLQL DDLMGFPEVF LNLDAILVLF LAWLVVVLCF FVLAIQLFIT LIEFKLTTLA
GFVLVPFALW NKTSFLAEKV LGNVVSAGVK VLVLAVIVGI GSGLFAQFQV HPDEPSIDHA
LVIMLASLTL LALGIFGPGI ATGLVSGAPQ LGAGAMAGAA IGAAGTAVAV GAAATGVGGA
VAAGARMAPA AAKLAGSGAR AATSAAGSAK SAFQAGSAAA GGGAKGAMAG LGNVAKTGAQ
SAGRAAASRA SAAGQRMAAP FRAGWKGDAG ASAGQAATSE APAGAAAAQT PEQPAWAKRL
QRRQQLTHAA TTTAHTLRGG DGGGSGQGPS LRDSDS
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