Gene PA14_30840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_30840 
Symbol 
ID4385913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2676132 
End bp2677544 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content64% 
IMG OID639325055 
Productputative signal transduction histidine kinase 
Protein accessionYP_790624 
Protein GI116050557 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000329503 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.67285e-16 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACGCGG CGACAGGGCG AGCGGAGGTG CGGATCATGG AGGCGTTACC CATCAGGAAC 
CGGCGCTTGC TGGTGATCGA TGAGCGGCAG GCGGATCGAG ACCGTGTATG CGGGTTGTTG
CAGGGAACCC TAGAGGCCGA ATCGCCTCCC GTGGCGCCTG AGCGGGGCTA CCAGGTGGAT
ACGGCGGGAA GCGCCGAGGA GGCCTTGGGG CGGATACGCT CGGCCCTCCA GGCCGATGCG
CCGTATGCCG TGGTGTTTCT CGGGATGTCG TCGGTAGGCG CGGATATTCC CGTTCTCGAG
CGGTTCTGGC GTCTCGACTC CCGCTTGCAG GTCGTGGTGC ATGCGCCTCC CGCCGATTTT
CCGCTATTGG CGCCGTGGGC CGCGGAAGAG CGCCTGCTGC TCCTCGGCCT GCCTTTGCAG
GGACAGGAGG TCCGCCAGAT GGCCGGCAAT CTCAGCGCCA AGTGGAACGT GACGGCTCAC
CTCCAATTGC AGATGAGCCG GATGGAGGCT GCCATCCAGG AGATCACCCA GGAAGTCGGC
CAGGCCAAGG AGGCGCTGGA GAAAGAGATC GGCGAGCGCA AGGAGCTGGA AAGCCAACTG
GTGCAGACGG AGAAGCTTGC CTCGATCGGC CACCTGGCCG CCGGCGTCGC CCATGAGATC
AATAACCCCA TCAGCTACGT TTCCTCCAAC TACACCACCC TGGAGGAGCA CGTCAGGCGT
TTGCTGGAGG TACTTGAAGC CTATGAAGAG GCTCGCCCCG CGATCCGCGA CGAGGCGCTG
GCAAGACGCC TGGAGCAGCT CGGCGAGCGG GTCGAACTGG CCTTCGTCAA GGAGGATGTC
GCTGTGTTGC TGCGCGAATC CAGGGAGGGA ATAGGGCGGG TGCGCAAGAT CGTCCAGGAC
CTGAAGAACT TCTCCCGCGT CGACGCCGAG GACGACTGGC AGTGGACCGA TCTGCACCAG
GGGATCGAGT CGACCCTCAA TATCGTCGCC AGCGAACTGA AGTACCGGGC CGACGTGGTC
CGCGAATACG GCGATCTGCC CGAGGTGAAG TGCCTGCCGT CGCAGATCAA CCAGGTGGTG
ATGAACCTGG TGATGAACGC GGCCCAGGCG ATGGGGCCTG AGCGGGGTCG CATCGTGATT
CGCACGGGGC ATACCCTGGA GCATGCCTGG ATCGAGGTGG AAGACTCGGG GCAGGGCATC
TCCCCCGAGA TCCTGCCGCG CATCTTCGAT CCGTTCTTCA CCACCAAGCC GGTAGGCAAG
GGGACCGGCC TGGGGTTGTC GCTCTCCTAC GGCATCGTCC AGAAACACGG CGGCACCATC
GAGGTACGCA GCCAGCCGGG AGTCGGCAGC GCTTTCCGGA TCGTGCTTCC CCTGGAATCG
CCTGGCAACC TGGGGGGAGC CCACGGAAAT TAA
 
Protein sequence
MHAATGRAEV RIMEALPIRN RRLLVIDERQ ADRDRVCGLL QGTLEAESPP VAPERGYQVD 
TAGSAEEALG RIRSALQADA PYAVVFLGMS SVGADIPVLE RFWRLDSRLQ VVVHAPPADF
PLLAPWAAEE RLLLLGLPLQ GQEVRQMAGN LSAKWNVTAH LQLQMSRMEA AIQEITQEVG
QAKEALEKEI GERKELESQL VQTEKLASIG HLAAGVAHEI NNPISYVSSN YTTLEEHVRR
LLEVLEAYEE ARPAIRDEAL ARRLEQLGER VELAFVKEDV AVLLRESREG IGRVRKIVQD
LKNFSRVDAE DDWQWTDLHQ GIESTLNIVA SELKYRADVV REYGDLPEVK CLPSQINQVV
MNLVMNAAQA MGPERGRIVI RTGHTLEHAW IEVEDSGQGI SPEILPRIFD PFFTTKPVGK
GTGLGLSLSY GIVQKHGGTI EVRSQPGVGS AFRIVLPLES PGNLGGAHGN