Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_30540 |
Symbol | |
ID | 4385918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2643371 |
End bp | 2644327 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639325028 |
Product | putative periplasmic aliphatic sulfonate-binding protein |
Protein accession | YP_790599 |
Protein GI | 116050582 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.558339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCAGA CCCTGAGCCT GTTCCTGCTT CTCTGCCTGC TCGTCGGCCA GGCCTGTGCC GACGAGCGCG TGACCCTGCG CCTGGCCGAC CAGAAGGGCA ACATGCGCGC CCAGTTGGAG GCTGCCGGCG CGCTGGACGA CCTGACCTAC GACATCCGCT GGTTCGAATT CCCCGCCGCC GCCGCCCTCG CCGAAGCACT CAATGCCGGT GCGGTGGATG CCGGCATCAT CGGCGACGCG CCATTGCTCT TCGCCCTGGC CGCCGGTGCC CGGCTGAAGG CCATCGCCGT CGACAAATCC GATCCCTACG GTACCGCCGT GCTGGTGAGA GGGGATTCGC CGCTGCGCTC GGCCAACGAC CTGAAAGGCC AGCGCATTGC CACCGGGCGC GGTTCCATCG GCCACTTCGT CGCGCTCAAG GCCTTGGCCT CGGTCGGGCT GGGCGAGAAG GACGTCGAAT TCCGCTTCCT CGGCCCGGTG GACGCGAAAA TGGCCCTCGC CAATGGTTCC GTGGATGCCT GGGCGACCTG GGAGCCCTAC ACCGCGTTCG CGGAGACCGC CGACAAGGCT CGGGTACTGG TCGACGGTCG CGGCCTGTGG GCTGGCAACA GCTTCCTCGC TGCTACCGAT AGCGCACTGG CCGACCCGGC GAAACGCGCC GTGCTGCAGG ACTACCTGCA ACGCCTGGCC AGCGCCCAGC GCTGGGCGTA CCTGCACCTG GACGAGTATT CGCGAAGCCT GGCGCAGATC ATCGGCTTCC CCGAGGACGC CGCGCGCTTG CAGTTCGAAC GTCGGCGCTT GCGTTGGCAG GCGCTGGATG AGCGAACGCT CGGCCAGCAG CAGGAGACCG CCGATTTCTA CCAGGCCCAT GGATTGATTC CGCAGCGCCT CGATGTGCGG CCGACCTTCG CCAGCGGCTT TGCGGTCAGG CAGGCGTCGG ATGCGGATAT CCGGTAG
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Protein sequence | MRQTLSLFLL LCLLVGQACA DERVTLRLAD QKGNMRAQLE AAGALDDLTY DIRWFEFPAA AALAEALNAG AVDAGIIGDA PLLFALAAGA RLKAIAVDKS DPYGTAVLVR GDSPLRSAND LKGQRIATGR GSIGHFVALK ALASVGLGEK DVEFRFLGPV DAKMALANGS VDAWATWEPY TAFAETADKA RVLVDGRGLW AGNSFLAATD SALADPAKRA VLQDYLQRLA SAQRWAYLHL DEYSRSLAQI IGFPEDAARL QFERRRLRWQ ALDERTLGQQ QETADFYQAH GLIPQRLDVR PTFASGFAVR QASDADIR
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