Gene PA14_30520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_30520 
Symbol 
ID4385919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2642373 
End bp2643359 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content70% 
IMG OID639325027 
Productputative periplasmic aliphatic sulfonate-binding protein 
Protein accessionYP_790598 
Protein GI116050583 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAC CCCTGTGTGT GCTTGCCGGC CTGCTGGCCG CGACCCTGCT GGCTGGAGCC 
GCCAGCGCCG CCGACCTCAT CAGCCTGCGC TTGGGCGATG TGAAGGGCGA CCGCTACGCC
GCCCTGCGCG CGTCCCGCGA GCTCGACGAC CTGCCGTACA AGCTGGAAAT GTCGGCGTTC
CCCTCCGGTG CACCGGTGCT CGAGGCGCTC AACGCCGGGG CCCTGGACAT AGGCTTTACC
GGCGACATCC CGTTCCTCTT CATCTACGCT GCCGGCGCGC CGCTCAAGGC GGTGGGCGCC
TGGCACTTCA ACCCGGCGAC CGTGGCGCTG GTGGTCGGCA AGGACTCGCC GATCCGTTCG
GTGGCCGGCC TCAAGGGCAA GCGCATTGCC GTCAATCGCG GCGGCTGGGG GCATTTCCTC
GCCCTTGGCG CGTTGCGTCG CGCCGGCCTC GGACCGCAGG ACGTAAGCTT TTCCTTCCTT
GGTCCGGTGG ACGGCCGCGC CGCCCTGGTG CGTGGCTCGG TAGACGCCTG GGTGCCCTGG
GAGCCCTATA CCTCCAGCGC CGTGCTGCTC GATCAGGCGC GGGTCATCGA CAACGGTGCC
GGGATCATGA CCGGCTACTC CTATGCCCTG GCCAGCGACG CTGCGATCGC CCGCAAGAAG
GCCGCGATCA GCGACCTGCT GACCCGCCTG GCGCGTGCCC AGGCCTGGGC CCTGAGGCAC
CCGGAGGCGT TCGCCGAGGC CCTGGCCAAG GATCTGAACA TGCCGCGCGA AGTCACTCGG
CGCTGGGTTG GCGAGGCGCG CATCAGTCCT GTGGTCTTCG GTCCGGAGGT TGCCGCCACC
TTGCAGACCG CCGCCGATTT CTTCCATGCC GAAGGCGTGC TGCCGAAGTC GCTGGAGGTC
GCCCAGGCGT TCGACTTCAG CCTGTCCGCC GGTGCCGCCG AAGTGGCCCG CCAGTTGCCC
GCCGACCTCC GCGTCGGCCA GCGTTGA
 
Protein sequence
MKRPLCVLAG LLAATLLAGA ASAADLISLR LGDVKGDRYA ALRASRELDD LPYKLEMSAF 
PSGAPVLEAL NAGALDIGFT GDIPFLFIYA AGAPLKAVGA WHFNPATVAL VVGKDSPIRS
VAGLKGKRIA VNRGGWGHFL ALGALRRAGL GPQDVSFSFL GPVDGRAALV RGSVDAWVPW
EPYTSSAVLL DQARVIDNGA GIMTGYSYAL ASDAAIARKK AAISDLLTRL ARAQAWALRH
PEAFAEALAK DLNMPREVTR RWVGEARISP VVFGPEVAAT LQTAADFFHA EGVLPKSLEV
AQAFDFSLSA GAAEVARQLP ADLRVGQR