Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_30520 |
Symbol | |
ID | 4385919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2642373 |
End bp | 2643359 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639325027 |
Product | putative periplasmic aliphatic sulfonate-binding protein |
Protein accession | YP_790598 |
Protein GI | 116050583 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAC CCCTGTGTGT GCTTGCCGGC CTGCTGGCCG CGACCCTGCT GGCTGGAGCC GCCAGCGCCG CCGACCTCAT CAGCCTGCGC TTGGGCGATG TGAAGGGCGA CCGCTACGCC GCCCTGCGCG CGTCCCGCGA GCTCGACGAC CTGCCGTACA AGCTGGAAAT GTCGGCGTTC CCCTCCGGTG CACCGGTGCT CGAGGCGCTC AACGCCGGGG CCCTGGACAT AGGCTTTACC GGCGACATCC CGTTCCTCTT CATCTACGCT GCCGGCGCGC CGCTCAAGGC GGTGGGCGCC TGGCACTTCA ACCCGGCGAC CGTGGCGCTG GTGGTCGGCA AGGACTCGCC GATCCGTTCG GTGGCCGGCC TCAAGGGCAA GCGCATTGCC GTCAATCGCG GCGGCTGGGG GCATTTCCTC GCCCTTGGCG CGTTGCGTCG CGCCGGCCTC GGACCGCAGG ACGTAAGCTT TTCCTTCCTT GGTCCGGTGG ACGGCCGCGC CGCCCTGGTG CGTGGCTCGG TAGACGCCTG GGTGCCCTGG GAGCCCTATA CCTCCAGCGC CGTGCTGCTC GATCAGGCGC GGGTCATCGA CAACGGTGCC GGGATCATGA CCGGCTACTC CTATGCCCTG GCCAGCGACG CTGCGATCGC CCGCAAGAAG GCCGCGATCA GCGACCTGCT GACCCGCCTG GCGCGTGCCC AGGCCTGGGC CCTGAGGCAC CCGGAGGCGT TCGCCGAGGC CCTGGCCAAG GATCTGAACA TGCCGCGCGA AGTCACTCGG CGCTGGGTTG GCGAGGCGCG CATCAGTCCT GTGGTCTTCG GTCCGGAGGT TGCCGCCACC TTGCAGACCG CCGCCGATTT CTTCCATGCC GAAGGCGTGC TGCCGAAGTC GCTGGAGGTC GCCCAGGCGT TCGACTTCAG CCTGTCCGCC GGTGCCGCCG AAGTGGCCCG CCAGTTGCCC GCCGACCTCC GCGTCGGCCA GCGTTGA
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Protein sequence | MKRPLCVLAG LLAATLLAGA ASAADLISLR LGDVKGDRYA ALRASRELDD LPYKLEMSAF PSGAPVLEAL NAGALDIGFT GDIPFLFIYA AGAPLKAVGA WHFNPATVAL VVGKDSPIRS VAGLKGKRIA VNRGGWGHFL ALGALRRAGL GPQDVSFSFL GPVDGRAALV RGSVDAWVPW EPYTSSAVLL DQARVIDNGA GIMTGYSYAL ASDAAIARKK AAISDLLTRL ARAQAWALRH PEAFAEALAK DLNMPREVTR RWVGEARISP VVFGPEVAAT LQTAADFFHA EGVLPKSLEV AQAFDFSLSA GAAEVARQLP ADLRVGQR
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