Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_29350 |
Symbol | pfeA |
ID | 4380717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2539430 |
End bp | 2541670 |
Gene Length | 2241 bp |
Protein Length | 746 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639324935 |
Product | outer membrane receptor FepA |
Protein accession | YP_790507 |
Protein GI | 116050673 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.93217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCTCAC GCGCCCTTCC CGCCGTTCCC TTCCTGCTGC TGTCCAGTTG CCTGCTCACC AACGCCGTAC ACGCCGCAGG CCAGGGCGAC GGCTCCGTCA TCGAGCTGGG CGAGCAGACC GTGGTCGCCA CCGCCCAGGA GGAAACCAAG CAGGCACCGG GGGTTTCCAT CATCACCGCC GAGGACATCG CCAAGCGACC GCCGAGCAAC GACCTGTCGC AGATCATCCG GACCATGCCG GGGGTCAACC TGACCGGCAA CAGCTCCAGC GGCCAGCGTG GCAACAACCG GCAGATCGAC ATCCGCGGCA TGGGCCCGGA GAACACCCTG ATCCTGGTCG ACGGCAAGCC GGTCAGCTCG CGCAACTCGG TGCGCTACGG CTGGCGCGGC GAGCGCGACA GCCGCGGCGA CACCAACTGG GTGCCGGCCG ACCAGGTCGA GCGCATCGAA GTGATCCGCG GCCCGGCGGC GGCGCGCTAC GGCAACGGCG CGGCGGGCGG CGTGGTGAAC ATCATCACCA AGCAGGCCGG CGCGGAAACC CACGGTAATC TCAGCGTCTA CAGCAATTTC CCGCAACACA AGGCCGAAGG CGCCAGCGAA CGGATGAGCT TCGGTCTCAA CGGGCCGCTC ACGGAAAACC TCAGCTACCG CGTCTACGGC AACATCGCCA AGACCGACTC GGACGACTGG GACATCAACG CCGGCCACGA ATCCAACCGC ACCGGCAAGC AGGCCGGCAC CCTCCCCGCC GGTCGCGAAG GCGTGCGCAA CAAGGACATC GACGGGCTGC TCAGCTGGCG CCTGACGCCC GAGCAGACCC TCGAGTTCGA GGCCGGCTTC AGCCGCCAGG GCAACATCTA CACCGGCGAC ACGCAGAACA CCAACAGCAA CAACTACGTG AAGCAGATGC TCGGCCACGA GACCAACCGC ATGTACCGCG AGACCTACTC GGTCACCCAT CGCGGCGAAT GGGACTTCGG CAGCTCGCTG GCCTACCTGC AGTACGAGAA GACCCGCAAC AGCCGGATCA ACGAAGGCCT GGCCGGCGGC ACCGAAGGTA TCTTCGACCC CAACAACGCC GGCTTCTACA CCGCCACCCT GCGCGACCTG ACCGCCCACG GCGAGGTCAA CCTGCCGCTG CACCTGGGCT ACGAGCAGAC CCTGACCCTC GGCAGCGAGT GGACCGAGCA GAAGCTCGAC GACCCCAGCT CCAACACCCA GAACACCGAG GAAGGCGGCT CGATCCCCGG TCTCGCCGGA AAGAACCGCA GCAGCAGTTC CTCGGCGCGG ATCTTCTCGC TGTTCGCCGA GGACAACATC GAGCTGATGC CCGGCACCAT GCTCACCCCA GGCCTGCGCT GGGACCACCA CGACATCGTC GGCGACAACT GGAGTCCATC GCTGAACCTG TCCCACGCGC TCACCGAGCG GGTCACCCTG AAGGCCGGTA TCGCCCGCGC CTACAAGGCC CCCAACCTGT ACCAGTTGAA CCCCGACTAC CTGCTCTACA GCCGTGGCCA GGGTTGCTAC GGGCAAAGCA CCAGTTGCTA CCTGCGCGGC AACGACGGCC TCAAGGCCGA GACCAGCGTG AACAAGGAAC TGGGCATCGA GTACAGCCAC GACGGCCTGG TAGCGGGGCT GACCTACTTC CGCAACGACT ACAAGAACAA GATCGAATCC GGCCTGTCGC CGGTCGACCA CGCCAGCGGC GGCAAGGGCG ACTACGCCAA CGCGGCGATC TACCAGTGGG AGAACGTGCC CAAGGCGGTG GTCGAGGGCC TCGAAGGCAC CCTGACCCTG CCCCTGGCCG ACGGCCTGAA GTGGAGCAAC AACTTCACCT ACATGCTGCA ATCGAAGAAC AAGGAAACCG GCGACGTGCT CTCGGTGACG CCGCGCTACA CCCTCAACTC GATGCTCGAC TGGCAGGCCA CCGACGACCT CTCACTGCAA GCCACGGTCA CCTGGTACGG CAAGCAGAAG CCGAAGAAAT ACGACTATCA CGGCGACCGT GTCACCGGCA GCGCCAACGA CCAGCTCTCG CCCTACGCCA TCGCCGGCCT CGGCGGCACC TATCGGTTGA GCAAGAACCT GAGCCTCGGC GCCGGCGTCG ACAACCTGTT CGACAAGCGC CTGTTCCGCG CCGGCAATGC CCAGGGCGTG GTCGGCATCG ACGGGGCCGG CGCGGCGACC TACAACGAGC CCGGACGGAC CTTCTATACC AGCCTGACCG CGTCGTTCTG A
|
Protein sequence | MSSRALPAVP FLLLSSCLLT NAVHAAGQGD GSVIELGEQT VVATAQEETK QAPGVSIITA EDIAKRPPSN DLSQIIRTMP GVNLTGNSSS GQRGNNRQID IRGMGPENTL ILVDGKPVSS RNSVRYGWRG ERDSRGDTNW VPADQVERIE VIRGPAAARY GNGAAGGVVN IITKQAGAET HGNLSVYSNF PQHKAEGASE RMSFGLNGPL TENLSYRVYG NIAKTDSDDW DINAGHESNR TGKQAGTLPA GREGVRNKDI DGLLSWRLTP EQTLEFEAGF SRQGNIYTGD TQNTNSNNYV KQMLGHETNR MYRETYSVTH RGEWDFGSSL AYLQYEKTRN SRINEGLAGG TEGIFDPNNA GFYTATLRDL TAHGEVNLPL HLGYEQTLTL GSEWTEQKLD DPSSNTQNTE EGGSIPGLAG KNRSSSSSAR IFSLFAEDNI ELMPGTMLTP GLRWDHHDIV GDNWSPSLNL SHALTERVTL KAGIARAYKA PNLYQLNPDY LLYSRGQGCY GQSTSCYLRG NDGLKAETSV NKELGIEYSH DGLVAGLTYF RNDYKNKIES GLSPVDHASG GKGDYANAAI YQWENVPKAV VEGLEGTLTL PLADGLKWSN NFTYMLQSKN KETGDVLSVT PRYTLNSMLD WQATDDLSLQ ATVTWYGKQK PKKYDYHGDR VTGSANDQLS PYAIAGLGGT YRLSKNLSLG AGVDNLFDKR LFRAGNAQGV VGIDGAGAAT YNEPGRTFYT SLTASF
|
| |