| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_29000 |
|---|
| Symbol | |
|---|
| ID | 4380728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 2507551 |
|---|
| End bp | 2508237 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639324904 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_790476 |
|---|
| Protein GI | 116050704 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0000723683 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGC GCATCCTGCA CGTCGTCACC AACGTCGCCC ACTATGCCGA TCCGACCCAG
CCCACCGGGC TGTGGCTGTC GGAGTTGACC CATGCCTACG AGATCTTCGC CGCCCGGGGC
TACCAGCAAC GCCTGGTCAG CCCCCGCGGC GGCGAGTCGC CGCTGGAGCC GCGCGCCCTC
GGCTGGCCCC ACGCCGACGC CAGCGCCAAG GCCTGGCTGG CCGACGAGGC ACGCCTGGCG
CTGCTGGCCG ACACTGCCGC TCCCGAGCAG GTCGACGCGG AGGCGTTCGA CGCCATCTAT
TTCACCGGCG GCCACGGCGT GATGTGGGAC TTCCCCGACG ACGCCGGGCT GCAGCGCCTG
ACCCGCGAGA TCTACCAGCG CGGCGGCATC GTCTCGTCGG TCTGCCACGG CTATTGCGGC
CTGCTCAACA CACGCCTGGA CGATGGCCGC CTGCTGGTCG CCGGGCGCCG CCTCACCGGC
TACTCCTGGA TCGAGGAAGT GCTCGCCGGG GTCGCCCGCA AGGTGCCGTA CAACGTCGAG
GAAGAAATGA AACGACGCGG TGCGCTCTAC GAAAGAAGCC TGCTGCCGTT CACCAGCAAG
GTGGTGGTCG ACGACCGCCT GGTCACCGGG CAGAACCCGC AGTCGGCCAA GGCCACGGCC
GAGCAGGTGG CCGCCCTGCT CGGCTGA
|
|---|
| Protein sequence | MTKRILHVVT NVAHYADPTQ PTGLWLSELT HAYEIFAARG YQQRLVSPRG GESPLEPRAL
GWPHADASAK AWLADEARLA LLADTAAPEQ VDAEAFDAIY FTGGHGVMWD FPDDAGLQRL
TREIYQRGGI VSSVCHGYCG LLNTRLDDGR LLVAGRRLTG YSWIEEVLAG VARKVPYNVE
EEMKRRGALY ERSLLPFTSK VVVDDRLVTG QNPQSAKATA EQVAALLG
|
|---|
| |