Gene PA14_28980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_28980 
Symbol 
ID4380730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2505374 
End bp2506324 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content72% 
IMG OID639324902 
ProductFe2+-dicitrate sensor 
Protein accessionYP_790474 
Protein GI116050706 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0000419388 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
CTGCAAGGAC TGACCATGGA ACTGGAGATC GAGGTGCTGG AGGCCGCCGC CACCTGGTAC 
GTGCGCTTCG GCGCGGAACC GCCGAACGAT GGCGAGCGCC AGGCCTGGCG CGAATGGCTG
GAGGCCGACC CGCGACACCG TCGGGCCTGG GAGCGTATCG AGCGCTTGCA GGGCCAATGG
GCGGCGCTGC CGGCGGAGAC CTCCTTGCAC ACGCTGGCAG GCGTGCGTGC GCGGCGCCGA
GCGCTGCTCA AGACGCTCGC CCTGCTGGCC TGCGCCGCGG GTAGCGGCTG GCTGGCGAGC
GGCGGCCTGC CTTACCGTGC GCTCCTCGCC GGGGAGCGCA CGGGCGTCGG CGAACGCCGC
CAACTGCGCC TGGCGGACGG TACCCGGGTC GACCTGAGCA GCGCCACCGC GCTGGACCTG
GCCTACGACG AAAGCCTGCG CCAGGCGTAC CTGTGGCGGG GCGAGATCCT CGTGGAAAGC
GCGCAGAGCG CTCGCCCGTT CCTCGTGCAC ACCGCACAAG GCAGCGTGCG CGCGCTGGGA
ACCCGTTTCA GCGTGCGTTG CGAGGGGCCG CGCACGCGCG TTTGCGTCCT CAGCCATGCA
GTGGAGCTAC GCCCGTTGCA AACGCCGACC CGGCCGATGC GCCTGCCAGC CGGCCAGCAG
GCTCTCTTCG ACGAGCGACG CGGCTACTCG TCGACGCCCT TGCGCGAAGG CGAAGGCAGT
TGGACGCAGG GCGTGCTGAC GGTGGTGGAC TGGCCGCTGG GCGAGTTCAT CGCCGAGCTG
TCCCGCTATC GCACCGGGGT GTTGCGCTGC GCCGCCGAGG TGGCGGAGCT GCGCCTTTCC
GGCGCCTACC GCCTGGACCG GATCGACGCG GTCCTGCAGA ACCTGGGCAA GTCGCTGCCG
GTGCGCGTGC GCTACCTGAC GCGTTACTGG GTCACCGTCG AGTCGGTCTG A
 
Protein sequence
MQGLTMELEI EVLEAAATWY VRFGAEPPND GERQAWREWL EADPRHRRAW ERIERLQGQW 
AALPAETSLH TLAGVRARRR ALLKTLALLA CAAGSGWLAS GGLPYRALLA GERTGVGERR
QLRLADGTRV DLSSATALDL AYDESLRQAY LWRGEILVES AQSARPFLVH TAQGSVRALG
TRFSVRCEGP RTRVCVLSHA VELRPLQTPT RPMRLPAGQQ ALFDERRGYS STPLREGEGS
WTQGVLTVVD WPLGEFIAEL SRYRTGVLRC AAEVAELRLS GAYRLDRIDA VLQNLGKSLP
VRVRYLTRYW VTVESV