Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_28980 |
Symbol | |
ID | 4380730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2505374 |
End bp | 2506324 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639324902 |
Product | Fe2+-dicitrate sensor |
Protein accession | YP_790474 |
Protein GI | 116050706 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0000419388 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | CTGCAAGGAC TGACCATGGA ACTGGAGATC GAGGTGCTGG AGGCCGCCGC CACCTGGTAC GTGCGCTTCG GCGCGGAACC GCCGAACGAT GGCGAGCGCC AGGCCTGGCG CGAATGGCTG GAGGCCGACC CGCGACACCG TCGGGCCTGG GAGCGTATCG AGCGCTTGCA GGGCCAATGG GCGGCGCTGC CGGCGGAGAC CTCCTTGCAC ACGCTGGCAG GCGTGCGTGC GCGGCGCCGA GCGCTGCTCA AGACGCTCGC CCTGCTGGCC TGCGCCGCGG GTAGCGGCTG GCTGGCGAGC GGCGGCCTGC CTTACCGTGC GCTCCTCGCC GGGGAGCGCA CGGGCGTCGG CGAACGCCGC CAACTGCGCC TGGCGGACGG TACCCGGGTC GACCTGAGCA GCGCCACCGC GCTGGACCTG GCCTACGACG AAAGCCTGCG CCAGGCGTAC CTGTGGCGGG GCGAGATCCT CGTGGAAAGC GCGCAGAGCG CTCGCCCGTT CCTCGTGCAC ACCGCACAAG GCAGCGTGCG CGCGCTGGGA ACCCGTTTCA GCGTGCGTTG CGAGGGGCCG CGCACGCGCG TTTGCGTCCT CAGCCATGCA GTGGAGCTAC GCCCGTTGCA AACGCCGACC CGGCCGATGC GCCTGCCAGC CGGCCAGCAG GCTCTCTTCG ACGAGCGACG CGGCTACTCG TCGACGCCCT TGCGCGAAGG CGAAGGCAGT TGGACGCAGG GCGTGCTGAC GGTGGTGGAC TGGCCGCTGG GCGAGTTCAT CGCCGAGCTG TCCCGCTATC GCACCGGGGT GTTGCGCTGC GCCGCCGAGG TGGCGGAGCT GCGCCTTTCC GGCGCCTACC GCCTGGACCG GATCGACGCG GTCCTGCAGA ACCTGGGCAA GTCGCTGCCG GTGCGCGTGC GCTACCTGAC GCGTTACTGG GTCACCGTCG AGTCGGTCTG A
|
Protein sequence | MQGLTMELEI EVLEAAATWY VRFGAEPPND GERQAWREWL EADPRHRRAW ERIERLQGQW AALPAETSLH TLAGVRARRR ALLKTLALLA CAAGSGWLAS GGLPYRALLA GERTGVGERR QLRLADGTRV DLSSATALDL AYDESLRQAY LWRGEILVES AQSARPFLVH TAQGSVRALG TRFSVRCEGP RTRVCVLSHA VELRPLQTPT RPMRLPAGQQ ALFDERRGYS STPLREGEGS WTQGVLTVVD WPLGEFIAEL SRYRTGVLRC AAEVAELRLS GAYRLDRIDA VLQNLGKSLP VRVRYLTRYW VTVESV
|
| |