Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_28760 |
Symbol | |
ID | 4380749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2475474 |
End bp | 2476088 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639324882 |
Product | hypothetical protein |
Protein accession | YP_790454 |
Protein GI | 116050725 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000000174621 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.000000000210809 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGCTCAAAA GAAACTCAGC ATGGCTCATC AATCGAACAA ATGGCCTATG TTGGCCAAAT GACCTGCCCC ACACTTTCAG TACCAAGTCA AACTTAGTAG AGTCCGTTTT CCGAGCAGGA GACGGCAGTG AAAAAGCGTT TTACCGAAGA GCAGATTCTC GACTTCCTCA ACAGGTCGAA GTCAGTGTCC CGGTAAAGGG GCTGTGCCGC CGGCACGGTT TCAGTGATGC CTCGTTCTAC ACCTGGCGGG ACAAGTTCGG CGGCATGACC GTGCCGGATG CCAAGCGCCT GAAGAATCTC GATCTGGAAA ACAGCCGGCT GAAGAAGCTG CTCGCCGAGG CCCACCTCGA CATCAAGGCG CTCAAAGTAG TCGCCCAGGG AAAGGGTAAG CCCGACAGCG CGACGGGAGG CGGTGCAGGA GATGCAGGCG CGAACTGGCA TCTCCGAGGG CAGTGCCTGT CAGTTGATCG GGCTGCCCCG CTCGGTGTTG CGCTACCACC CGCGAGCCAG CGTGCAAAAC ACCGAGCTAC AAGCCCAACT AGTGGAGCTG GCCCCAGCAG CGTCGGCACT TTGGCTATCG CCACCTGCAC ATCCTGCTGC GGCGTGCTGG CGTGA
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Protein sequence | MLKRNSAWLI NRTNGLCWPN DLPHTFSTKS NLVESVFRAG DGSEKAFYRR ADSRLPQQVE VSVPVKGLCR RHGFSDASFY TWRDKFGGMT VPDAKRLKNL DLENSRLKKL LAEAHLDIKA LKVVAQGKGK PDSATGGGAG DAGANWHLRG QCLSVDRAAP LGVALPPASQ RAKHRATSPT SGAGPSSVGT LAIATCTSCC GVLA
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