Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_28650 |
Symbol | thrS |
ID | 4380758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2467219 |
End bp | 2469141 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639324872 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_790445 |
Protein GI | 116050734 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00000000737785 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCATCA TTACTCTTCC CGACGGCAGT CAACGTTCCT TCGATCACCC GGTCTCCGTG GCCGAGGTGG CCCAATCCAT CGGCGCAGGC CTGGCCAAGG CGACCCTCGC CGGCAAGGTC GACGGCCGCC TGGTCGACGC CTGCGACACC ATCGATCGCG ACGCGACCCT GCAGATCATC ACGCCCAAGG ACGAGGAAGG ACTGGAGATC ATCCGCCACT CCTGCGCCCA CCTGGTCGGC CATGCGGTCA AGCAGCTCTA TCCGACCGCG AAGATGGTCA TCGGCCCGGT GATCGAGGAA GGCTTCTACT ACGACATCTT CTTCGAGCGC CCCTTCACCC CCGAGGACAT GGCGGCGATC CAGCAGCGCA TGCGCGAGCT GATCGACAAG GACTACGACG TGATCAAGAA GATGACCCCG CGCGCCGAGG TCATCGAGCT GTTCAAGTCC CGTGGCGAAG ACTACAAGCT GCGCCTGATC GACGACATGC CGGACGAGAA GGCCATGGGC CTGTACTTCC ATGAGGAGTA CGTGGACATG TGCCGCGGCC CGCACGTGCC GAACACCCGC TTCCTCAAGG CGTTCCAGCT GACCAAGATT TCCGGCGCCT ACTGGCGCGG CGACTCGAAG AACGAGCAGT TGCAACGCAT CTACGGCACC GCCTGGGCCG ACAAGAAGCA ACTGGCGGCC TACATCCAGC GCATCGAAGA GGCCGAGAAG CGCGACCATC GCCGCATCGG CAAGCAGCTC GACCTGTTCC ACCTGCAGGA AGAAGCGCCG GGCATGGTGT TCTGGCACCC GAATGGCTGG AGCGTCTACC AGGTGCTCGA GCAGTACATG CGCAAGGTCC AGCGCGACCA TGGCTATGTC GAAGTGCGTA CCCCGCAGGT GGTCGACCGC ATCCTCTGGG AGCGTTCGGG CCACTGGTCG AACTACGCCG AGAACATGTT CACCACCTCC TCGGAAAGCC GCGACTACGC GGTCAAGCCG ATGAACTGCC CGTGCCACGT GCAGATCTTC AACCAGGGCC TGAAGTCCTA CCGCGACCTG CCGCTGCGCC TCGCCGAGTT CGGCGCCTGC CACCGCAACG AGCCGTCCGG CGCGCTGCAC GGGATCATGC GCGTACGCGG CTTCACCCAG GACGACGCGC ATATCTTCTG CACCGAAGAG CAGGTGAAGA AGGAAGCGGC CGATTTCATC AAGCTGACCT TGCAGGTCTA CCGCGACTTC GGTTTCACCG ACATCGCCAT GAAGCTGTCG ACCCGTCCGG CCAAGCGCGT CGGTTCCGAC GAGCTGTGGG ATCGCGCCGA AGGCGCGCTG GCCGATGCGC TGAACGAATC CGGCCTGGCC TGGGAATACC AGCCGGGCGA GGGCGCGTTC TATGGGCCAA AGATCGAGTT CACCCTGAAG GACTGCCTCG GCCGTAACTG GCAGTGCGGC ACCCTGCAGT ACGACCCGAA CCTGCCGGAG CGCCTGGACG CCAGCTACAT CGCCGAGGAC AACAACCGTA AGCGCCCGGT GATGCTGCAC CGTGCGATCC TCGGGTCCTT CGAGCGCTTC ATCGGCATGC TCATCGAGCA CTACGCCGGA GCCTTCCCGG CCTGGCTGGC GCCGACCCAG GCGGTGGTGA TGAATATCAC CGACAAGCAG GCCGATTTCG CCGCCGAGGT GGTGCGGATC CTCGGGGAAA GCGGATTCCG TGCCAAGTCC GACTTGAGAA ACGAGAAGAT CGGCTTTAAA ATCCGCGAGC ATACTTTGCT CAAGGTTCCC TATCTCTTGG TTATTGGAGA TCGGGAAGTT GAATCGAAGG CCGTCGCGGT GCGTACGCGC GAAGGGGAAG ACCTGGGCTC CATGCCCGTC ACCCAGTTCG CTGAGCTGTT GGCACAGGCG GTTTCCCGGC GTGGTCGCCA AGACTCGGAG TAA
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Protein sequence | MPIITLPDGS QRSFDHPVSV AEVAQSIGAG LAKATLAGKV DGRLVDACDT IDRDATLQII TPKDEEGLEI IRHSCAHLVG HAVKQLYPTA KMVIGPVIEE GFYYDIFFER PFTPEDMAAI QQRMRELIDK DYDVIKKMTP RAEVIELFKS RGEDYKLRLI DDMPDEKAMG LYFHEEYVDM CRGPHVPNTR FLKAFQLTKI SGAYWRGDSK NEQLQRIYGT AWADKKQLAA YIQRIEEAEK RDHRRIGKQL DLFHLQEEAP GMVFWHPNGW SVYQVLEQYM RKVQRDHGYV EVRTPQVVDR ILWERSGHWS NYAENMFTTS SESRDYAVKP MNCPCHVQIF NQGLKSYRDL PLRLAEFGAC HRNEPSGALH GIMRVRGFTQ DDAHIFCTEE QVKKEAADFI KLTLQVYRDF GFTDIAMKLS TRPAKRVGSD ELWDRAEGAL ADALNESGLA WEYQPGEGAF YGPKIEFTLK DCLGRNWQCG TLQYDPNLPE RLDASYIAED NNRKRPVMLH RAILGSFERF IGMLIEHYAG AFPAWLAPTQ AVVMNITDKQ ADFAAEVVRI LGESGFRAKS DLRNEKIGFK IREHTLLKVP YLLVIGDREV ESKAVAVRTR EGEDLGSMPV TQFAELLAQA VSRRGRQDSE
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