Gene PA14_26260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_26260 
Symbol 
ID4380968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2290777 
End bp2291946 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content71% 
IMG OID639324674 
Productputative hydrolase 
Protein accessionYP_790252 
Protein GI116050924 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.474103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.713071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC CTGCCGTCCT GCCCGCCATC GCGGCGCTGC GGGAAGAGAT GGTTACCTTG 
CGCCGCCACA TCCATGCCCA CCCGGAGCTG GGTTTCGAGG AACGGCGAAC CGCCGCGCTG
GTCGCCGAAT GCCTGGAGGC CTGGGGCTAC CAGGTCAGCC GTGGGGTGGG TCGCACCGGC
GTGGTCGGCA CCCTGTGCCG CGGCGAGGGC CCCGCGCTGG GCCTGCGCGC CGACATGGAC
GCGCTGCCGA TCCAGGAAGC CACCGGCCTG CCCTACGCCA GCCAGGTGGA CGGCGTGATG
CACGCCTGCG GCCACGACGG CCACACCGCG ATGCTCCTCG CCGCGGCCAG GCACCTGGTC
GAGTCGCCGC ACTGGCGCGG CACCCTGCAA CTGATCTTCC AGCCTGCCGA AGAGGGCCTC
GGCGGTGCCC GCGCGATGCT CGACGACGGG CTGCTGGAGC GCTTCCCCTG CGACGCCATC
TTCGCCATGC ACAACGTCCC GGGATACCCC GTCGGCCACC TCGGCTTCCA TCCCGGCCCC
TTCATGGCCT CGGCCGACAC CGTGGTCATC CGCGTGATCG GCAGCGGCGG CCACGGCGCG
GTGCCGCAGC GCACCGTCGA CCCGGTGGTG GTCTGCTCCG CCATCGTGCT GGCCTTGCAG
AGCATCGTCT CGCGCAACGT CGACCCGCAG GACACCGCGA TCGTCAGCGT CGGCGCAATC
CATGCCGGGA CGGTCTCCAA CGTGATCCCG GCCAGCGCCG AAATGATCCT CAGCGTCCGC
GCCCTGACCG CGGAAACCCG TGCCCTGCTG GAGCGCCGCA TCGGCGAACT GGCCCGCGGC
CAGGCCGCCA GCTTCGGCGC GCGGGCGGAG GTCGACTACC GGCATTGCCA TCCGGTGCTG
GTCAACCATC CCGGGCAGAC CGCGTTCGCC CGCGAGGTGG CCCGCGACTG GCTGGGCGAG
GAATGCCTGA TCGACGGACT GCGGCCGTTC ACCGCCAGCG AGGATTTCGC CTTCATCCTC
GAACGCTGTC CCGGCAGCTA CCTGGTGATC GGCAACGGCC AGGGCGAGAG CGGCTGCCAG
TTGCACAACC CCGGCTACGA CTTCAACGAC GACTGCCTGG CCGTCGGCGC CAGCTACTGG
GTGCGACTGG CCGAGCGCTT CCTGGCCTGA
 
Protein sequence
MTEPAVLPAI AALREEMVTL RRHIHAHPEL GFEERRTAAL VAECLEAWGY QVSRGVGRTG 
VVGTLCRGEG PALGLRADMD ALPIQEATGL PYASQVDGVM HACGHDGHTA MLLAAARHLV
ESPHWRGTLQ LIFQPAEEGL GGARAMLDDG LLERFPCDAI FAMHNVPGYP VGHLGFHPGP
FMASADTVVI RVIGSGGHGA VPQRTVDPVV VCSAIVLALQ SIVSRNVDPQ DTAIVSVGAI
HAGTVSNVIP ASAEMILSVR ALTAETRALL ERRIGELARG QAASFGARAE VDYRHCHPVL
VNHPGQTAFA REVARDWLGE ECLIDGLRPF TASEDFAFIL ERCPGSYLVI GNGQGESGCQ
LHNPGYDFND DCLAVGASYW VRLAERFLA